SMTL ID : 2aca.1

X-ray structure of a putative adenylate cyclase Q87NV8 from Vibrio parahaemolyticus at the 2.25 A resolution. Northeast Structural Genomics Target VpR19.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

homo-dimer

Ligands

5 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 7 residues within 4Å: Chain B: E.14, K.16, K.78, E.138, S.174, Y.175 Ligands: PO4.2 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:E.138, B:Y.175 Water bridges: B:E.14, B:K.16, B:E.138 Salt bridges: B:K.16, B:K.78 PO4.2: 6 residues within 4Å: Chain B: E.14, R.65, K.78, R.115, E.138 Ligands: PO4.1 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:E.14 Water bridges: B:K.16, B:K.16, B:R.65, B:R.65, B:K.113, B:R.115 Salt bridges: B:R.65, B:K.78, B:R.115 PO4.3: 8 residues within 4Å: Chain A: K.16, K.78, E.138, S.174, Y.175, K.176, E.177 Ligands: PO4.4 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.138, A:Y.175, A:K.176, A:E.177 Salt bridges: A:K.16, A:K.78 PO4.4: 6 residues within 4Å: Chain A: E.14, R.65, K.78, R.115, E.138 Ligands: PO4.3 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.138, A:E.138 Water bridges: A:R.115 Salt bridges: A:R.65, A:K.78, A:R.115 PO4.5: 5 residues within 4Å: Chain B: R.18, R.170, E.171, H.172, R.173 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:E.171, B:E.171, B:H.172 Water bridges: B:R.173 Salt bridges: B:R.18, B:H.172

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

 - 

Release Date

2005-08-02

Peptides

putative adenylate cyclase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

putative adenylate cyclase