Toggle navigation
Modelling
myWorkspace
Alignment Mode
User Template Mode
DeepView Project Mode
Modelling API
Template Library
Repository
SWISS-MODEL Repository
Repository API
3D-Beacons API
Annotation Projects
TBvar3D
Tools
Structure Assessment
Structure Comparison
QMEAN
Documentation
SWISS-MODEL
Examples
Video Tutorial
New Features
SWISS-MODEL Repository
QMEAN
Structure Assessment
Structure Comparison
TBvar3D
Protein Structure Course
References
Log in
Create Account
SMTL ID : 2ae2.1
(2 other biounits)
TROPINONE REDUCTASE-II COMPLEXED WITH NADP+ AND PSEUDOTROPINE
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 1.90 Å
Oligo State
homo-dimer
Ligands
2 x
NAP
:
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
(Non-covalent)
NAP.1:
30 residues within 4Å:
Chain A:
G.16
,
S.18
,
R.19
,
G.20
,
I.21
,
S.40
,
R.41
,
E.45
,
C.65
,
D.66
,
L.67
,
N.94
,
A.95
,
G.96
,
I.97
,
I.117
,
I.144
,
S.145
,
S.146
,
Y.159
,
K.163
,
P.189
,
G.190
,
V.191
,
I.192
,
T.194
,
S.195
,
L.196
,
V.197
Ligands:
PTO.2
28
PLIP interactions
:
28 interactions with chain A
Hydrophobic interactions:
A:P.189
Hydrogen bonds:
A:G.16
,
A:S.18
,
A:R.19
,
A:I.21
,
A:R.41
,
A:D.66
,
A:L.67
,
A:S.68
,
A:N.94
,
A:K.163
,
A:I.192
,
A:I.192
,
A:T.194
,
A:S.195
,
A:S.195
,
A:L.196
Water bridges:
A:R.19
,
A:R.19
,
A:G.22
,
A:S.40
,
A:R.41
,
A:N.42
,
A:S.68
,
A:N.94
Salt bridges:
A:R.19
,
A:R.19
,
A:R.41
NAP.3:
31 residues within 4Å:
Chain B:
G.16
,
G.17
,
S.18
,
R.19
,
G.20
,
I.21
,
S.40
,
R.41
,
C.65
,
D.66
,
L.67
,
S.68
,
N.94
,
A.95
,
G.96
,
I.97
,
I.117
,
I.144
,
S.145
,
S.146
,
Y.159
,
K.163
,
P.189
,
G.190
,
V.191
,
I.192
,
T.194
,
S.195
,
L.196
,
V.197
Ligands:
PTO.4
28
PLIP interactions
:
28 interactions with chain B
Hydrophobic interactions:
B:I.21
,
B:P.189
Hydrogen bonds:
B:G.16
,
B:S.18
,
B:S.18
,
B:R.19
,
B:I.21
,
B:S.40
,
B:R.41
,
B:D.66
,
B:L.67
,
B:S.68
,
B:N.94
,
B:K.163
,
B:I.192
,
B:I.192
,
B:T.194
,
B:T.194
,
B:S.195
,
B:S.195
,
B:L.196
Water bridges:
B:R.19
,
B:G.22
,
B:R.41
,
B:N.94
Salt bridges:
B:R.19
,
B:R.19
,
B:R.41
2 x
PTO
:
PSEUDOTROPINE
(Non-covalent)
PTO.2:
9 residues within 4Å:
Chain A:
Y.100
,
S.146
,
S.148
,
E.156
,
Y.159
,
L.196
,
L.210
,
L.213
Ligands:
NAP.1
6
PLIP interactions
:
6 interactions with chain A
Hydrophobic interactions:
A:L.196
Hydrogen bonds:
A:S.146
,
A:S.146
,
A:S.148
,
A:Y.159
Salt bridges:
A:E.156
PTO.4:
9 residues within 4Å:
Chain B:
Y.100
,
S.146
,
E.156
,
Y.159
,
L.196
,
V.197
,
L.210
,
L.213
Ligands:
NAP.3
6
PLIP interactions
:
6 interactions with chain B
Hydrophobic interactions:
B:V.197
,
B:L.210
Hydrogen bonds:
B:S.146
,
B:S.146
,
B:Y.159
Salt bridges:
B:E.156
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Yamashita, A. et al., Structure of tropinone reductase-II complexed with NADP+ and pseudotropine at 1.9 A resolution: implication for stereospecific substrate binding and catalysis. Biochemistry (1999)
Release Date
1999-02-02
Peptides
PROTEIN (TROPINONE REDUCTASE-II):
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
Export Alignment
FASTA format
Clustal Format
PNG Image
Secondary Structure
None
DSSP
PSIPRED
SSpro
Colour Scheme
Fade Mismatches
Enhance Mismatches
Chain
Unique Chain
Rainbow
2° Structure
Bfactor
Bfactor Range
SOA
Entropy
Clustal
Hydrophobic
Size
Charged
Polar
Proline
Ser/Thr
Cysteine
Aliphatic
Aromatic
No Colour
Background
3D Viewer
NGL
PV
2D
FASTA
Multi FASTA
ClustalW
PNG
PROTEIN (TROPINONE REDUCTASE-II)
Toggle Identical (AB)
Related Entries With Identical Sequence
2ae1.1
|
2ae1.2
|
2ae2.2
|
2ae2.3
Cartoon
Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog
Background
Transparent
Resolution
Low
Medium
High
Extreme