SMTL ID : 2aeo.1

Crystal structure of cisplatinated bovine Cu,Zn superoxide dismutase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-tetramer

Ligands

4 x CU: COPPER (II) ION(Non-covalent)

CU.1: 4 residues within 4Å: Chain A: H.44, H.46, H.61, H.118 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.44, A:H.46, A:H.61, A:H.118, H2O.1 CU.4: 4 residues within 4Å: Chain B: H.44, H.46, H.61, H.118 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.44, B:H.46, B:H.61, B:H.118, H2O.7 CU.7: 4 residues within 4Å: Chain C: H.44, H.46, H.61, H.118 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:H.44, C:H.46, C:H.61, C:H.118, H2O.12 CU.10: 4 residues within 4Å: Chain D: H.44, H.46, H.61, H.118 5 PLIP interactions: 4 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:H.44, D:H.46, D:H.61, D:H.118, H2O.18

4 x ZN: ZINC ION(Non-covalent)

ZN.2: 5 residues within 4Å: Chain A: H.61, H.69, H.78, D.81, K.134 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:H.61, A:H.69, A:H.78, A:D.81, A:D.81 ZN.5: 5 residues within 4Å: Chain B: H.61, H.69, H.78, D.81, K.134 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:H.61, B:H.69, B:H.78, B:D.81, B:D.81 ZN.8: 5 residues within 4Å: Chain C: H.61, H.69, H.78, D.81, K.134 5 PLIP interactions: 5 interactions with chain C Metal complexes: C:H.61, C:H.69, C:H.78, C:D.81, C:D.81 ZN.11: 5 residues within 4Å: Chain D: H.61, H.69, H.78, D.81, K.134 5 PLIP interactions: 5 interactions with chain D Metal complexes: D:H.61, D:H.69, D:H.78, D:D.81, D:D.81

4 x CPT: Cisplatin(Non-covalent)

CPT.3: 4 residues within 4Å: Chain A: T.17, H.19, G.31, S.32 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.19 CPT.6: 4 residues within 4Å: Chain B: T.17, H.19, G.31, S.32 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:H.19 CPT.9: 4 residues within 4Å: Chain C: T.17, H.19, G.31, S.32 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:H.19 CPT.12: 4 residues within 4Å: Chain D: T.17, H.19, G.31, S.32 1 PLIP interactions: 1 interactions with chain D Metal complexes: D:H.19

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Calderone, V. et al., Structural investigation of cisplatin-protein interactions: selective platination of His19 in a cuprozinc superoxide dismutase. Angew. Chem. Int. Ed. Engl. (2006)

Release Date

2006-05-02

Peptides

Superoxide dismutase [Cu-Zn]: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Superoxide dismutase [Cu-Zn]

Related Entries With Identical Sequence