SMTL ID : 2agc.1

Crystal Structure of mouse GM2- activator Protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x MYR: MYRISTIC ACID(Non-covalent)

MYR.1: 4 residues within 4Å: Chain A: I.17, F.121, P.124, L.126 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:I.17, A:F.121, A:P.124

2 x DAO: LAURIC ACID(Non-covalent)

DAO.2: 11 residues within 4Å: Chain A: I.22, V.55, L.72, G.73, Y.77, W.131, Y.137, I.139, I.155, A.157, L.159 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.22, A:V.55, A:Y.137, A:Y.137, A:I.139, A:I.155, A:A.157, A:L.159 Hydrogen bonds: A:G.73, A:Y.77 DAO.3: 6 residues within 4Å: Chain A: Y.114, S.141, L.143, G.151, C.152, I.153 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Y.114, A:L.143 Hydrogen bonds: A:S.141

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wright, C.S. et al., Crystal Structure Analysis of Phosphatidylcholine-GM2-Activator Product Complexes: Evidence for Hydrolase Activity. Biochemistry (2005)

Release Date

2005-10-25

Peptides

Ganglioside GM2 activator: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ganglioside GM2 activator