SMTL ID : 2ahr.3 (3 other biounits)

Crystal Structures of 1-Pyrroline-5-Carboxylate Reductase from Human Pathogen Streptococcus pyogenes

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

homo-dimer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 5 residues within 4Å: Chain A: G.92, R.97, A.256, K.257, L.259 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.97, A:L.259 NA.4: 5 residues within 4Å: Chain B: G.92, R.97, A.256, K.257, L.259 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.97, B:L.259, B:L.259

2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.2: 22 residues within 4Å: Chain A: G.10, V.11, G.12, K.13, M.14, G.33, S.34, R.38, H.54, G.67, I.68, K.69, P.70, L.72, V.76, M.89, A.90, A.91, M.112, P.113 Chain B: I.222, S.224 11 PLIP interactions: 1 interactions with chain B, 10 interactions with chain A Hydrogen bonds: B:A.221, A:K.13, A:S.34, A:S.34, A:I.68, A:A.91 Water bridges: A:V.11, A:G.12, A:A.15, A:S.34 Salt bridges: A:R.38 NAP.5: 24 residues within 4Å: Chain A: A.221, I.222, S.224, P.225 Chain B: G.10, V.11, G.12, K.13, M.14, G.33, S.34, R.38, H.54, G.67, I.68, K.69, P.70, V.76, M.89, A.90, A.91, M.112, P.113, M.115 13 PLIP interactions: 11 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:K.13, B:S.34, B:I.68, B:A.91, A:A.221, A:S.224 Water bridges: B:V.11, B:A.15, B:A.15, B:S.34, B:S.34, B:K.69 Salt bridges: B:R.38

2 x FMT: FORMIC ACID(Non-functional Binders)

FMT.3: 5 residues within 4Å: Chain A: D.250, I.253, D.254, K.257 Chain B: N.186 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Water bridges: A:D.250, A:D.250, A:D.254, B:N.186 FMT.6: 5 residues within 4Å: Chain A: N.186 Chain B: D.250, I.253, D.254, K.257 2 PLIP interactions: 2 interactions with chain A Water bridges: A:K.185, A:K.185

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nocek, B. et al., Crystal Structures of Delta(1)-Pyrroline-5-carboxylate Reductase from Human Pathogens Neisseria meningitides and Streptococcus pyogenes. J.Mol.Biol. (2005)

Release Date

2005-09-13

Peptides

putative pyrroline carboxylate reductase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

putative pyrroline carboxylate reductase

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