- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x MG: MAGNESIUM ION(Non-covalent)
- 3 x ZN: ZINC ION(Non-covalent)
ZN.2: 5 residues within 4Å:- Chain A: H.20
- Chain B: H.20
- Chain C: H.20
- Ligands: ZN.6, ZN.10
3 PLIP interactions:1 interactions with chain A, 1 interactions with chain B, 1 interactions with chain C- Metal complexes: A:H.20, B:H.20, C:H.20
ZN.6: 5 residues within 4Å:- Chain A: H.20
- Chain B: H.20
- Chain C: H.20
- Ligands: ZN.2, ZN.10
3 PLIP interactions:1 interactions with chain A, 1 interactions with chain B, 1 interactions with chain C- Metal complexes: A:H.20, B:H.20, C:H.20
ZN.10: 5 residues within 4Å:- Chain A: H.20
- Chain B: H.20
- Chain C: H.20
- Ligands: ZN.2, ZN.6
3 PLIP interactions:1 interactions with chain A, 1 interactions with chain B, 1 interactions with chain C- Metal complexes: A:H.20, B:H.20, C:H.20
- 3 x 144: TRIS-HYDROXYMETHYL-METHYL-AMMONIUM(Non-covalent)
144.3: 5 residues within 4Å:- Chain A: E.52
- Chain B: E.52
- Chain C: E.52
- Ligands: 144.7, 144.11
3 PLIP interactions:1 interactions with chain B, 1 interactions with chain A, 1 interactions with chain C- Salt bridges: B:E.52, A:E.52, C:E.52
144.7: 5 residues within 4Å:- Chain A: E.52
- Chain B: E.52
- Chain C: E.52
- Ligands: 144.3, 144.11
3 PLIP interactions:1 interactions with chain B, 1 interactions with chain A, 1 interactions with chain C- Salt bridges: B:E.52, A:E.52, C:E.52
144.11: 5 residues within 4Å:- Chain A: E.52
- Chain B: E.52
- Chain C: E.52
- Ligands: 144.3, 144.7
4 PLIP interactions:1 interactions with chain B, 2 interactions with chain A, 1 interactions with chain C- Salt bridges: B:E.52, A:E.52, C:E.52
- Water bridges: A:E.52
- 3 x P1D: ((2S,3AS,4R,6S)-4-(HYDROXYMETHYL)-6-(4-OXO-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)-TETRAHYDROFURO[3,4-D][1,3]DIOXO L-2-YL)METHYLPHOSPHONIC ACID(Non-covalent)
P1D.4: 20 residues within 4Å:- Chain A: G.32, S.33, R.84, H.86, Y.88, N.115, A.116, A.117, G.118, F.200, E.201, V.217, G.218, M.219, S.220, T.242, N.243, V.245, H.257, V.260
18 PLIP interactions:18 interactions with chain A- Hydrogen bonds: A:S.33, A:R.84, A:Y.88, A:A.116, A:E.201, A:M.219, A:S.220, A:S.220, A:T.242, A:N.243, A:N.243
- Water bridges: A:S.33, A:E.201, A:E.201, A:S.220, A:S.220
- Salt bridges: A:H.86
- pi-Stacking: A:F.200
P1D.8: 20 residues within 4Å:- Chain B: G.32, S.33, R.84, H.86, Y.88, N.115, A.116, A.117, G.118, F.200, E.201, V.217, G.218, M.219, S.220, T.242, N.243, V.245, H.257, V.260
17 PLIP interactions:17 interactions with chain B- Hydrogen bonds: B:S.33, B:R.84, B:A.116, B:E.201, B:M.219, B:S.220, B:S.220, B:N.243, B:N.243, B:H.257
- Water bridges: B:S.33, B:E.201, B:E.201, B:S.220, B:S.220
- Salt bridges: B:H.86
- pi-Stacking: B:F.200
P1D.12: 20 residues within 4Å:- Chain C: G.32, S.33, R.84, H.86, Y.88, N.115, A.116, A.117, G.118, F.200, E.201, V.217, G.218, M.219, S.220, T.242, N.243, V.245, H.257, V.260
17 PLIP interactions:17 interactions with chain C- Hydrogen bonds: C:S.33, C:R.84, C:A.116, C:E.201, C:M.219, C:S.220, C:S.220, C:N.243, C:N.243, C:H.257
- Water bridges: C:S.33, C:E.201, C:E.201, C:S.220, C:S.220
- Salt bridges: C:H.86
- pi-Stacking: C:F.200
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Toms, A.V. et al., Novel multisubstrate inhibitors of mammalian purine nucleoside phosphorylase. Acta Crystallogr.,Sect.D (2005)
- Release Date
- 2005-10-25
- Peptides
- Purine nucleoside phosphorylase: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x MG: MAGNESIUM ION(Non-covalent)
- 3 x ZN: ZINC ION(Non-covalent)
- 3 x 144: TRIS-HYDROXYMETHYL-METHYL-AMMONIUM(Non-covalent)
- 3 x P1D: ((2S,3AS,4R,6S)-4-(HYDROXYMETHYL)-6-(4-OXO-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)-TETRAHYDROFURO[3,4-D][1,3]DIOXO L-2-YL)METHYLPHOSPHONIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Toms, A.V. et al., Novel multisubstrate inhibitors of mammalian purine nucleoside phosphorylase. Acta Crystallogr.,Sect.D (2005)
- Release Date
- 2005-10-25
- Peptides
- Purine nucleoside phosphorylase: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A