SMTL ID : 2aib.1

beta-cinnamomin in complex with ergosterol

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.10 Å

Oligo State

homo-dimer

Ligands

2 x ERG: ERGOSTEROL(Non-covalent)

ERG.1: 15 residues within 4Å: Chain A: L.15, V.16, Y.33, M.35, P.42, Y.47, M.59, I.60, I.63, V.75, P.76, L.82, V.84, Y.87 Chain B: L.19 11 PLIP interactions: 10 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:L.15, A:Y.33, A:P.42, A:I.60, A:I.63, A:V.75, A:L.82, A:V.84, A:Y.87, B:L.19 Water bridges: A:Y.87 ERG.3: 18 residues within 4Å: Chain A: V.16 Chain B: Y.12, L.15, V.16, Y.33, M.35, L.36, P.42, Y.47, M.59, I.60, I.63, V.75, P.76, T.77, L.82, V.84, Y.87 15 PLIP interactions: 14 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:L.15, B:Y.33, B:L.36, B:P.42, B:I.60, B:I.63, B:V.75, B:P.76, B:T.77, B:L.82, B:V.84, B:Y.87, A:V.16 Hydrogen bonds: B:Y.47 Water bridges: B:Y.87

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.2: 9 residues within 4Å: Chain A: F.24, S.28, S.34, M.35, L.36 Chain B: P.76, T.77, S.78, G.79 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.28, A:S.34, A:M.35, A:L.36, A:T.37

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 3 residues within 4Å: Chain B: T.14, L.66, N.67 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.67, B:N.67 GOL.5: 2 residues within 4Å: Chain B: Q.26, K.29 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Q.26, B:Q.26, B:K.29

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rodrigues, M.L. et al., Crystal structures of the free and sterol-bound forms of beta-cinnamomin. Biochim.Biophys.Acta (2006)

Release Date

2006-01-17

Peptides

Beta-elicitin cinnamomin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Beta-elicitin cinnamomin

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