SMTL ID : 2ajs.1

Crystal structure of cocaine catalytic antibody 7A1 Fab' in complex with heptaethylene glycol

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

hetero-1-1-mer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 9 residues within 4Å: Chain A: L.165, S.167, S.181, T.183 Chain B: P.173, V.175, T.182, L.183, T.184 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:S.167, A:S.181, A:T.183, B:P.173, B:T.184 GOL.2: 3 residues within 4Å: Chain A: S.64, R.66, K.84 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.66 Water bridges: A:S.64 GOL.3: 3 residues within 4Å: Chain A: K.204, S.206, T.207 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.206, A:T.207 Water bridges: A:T.207, A:T.207 GOL.4: 1 residues within 4Å: Chain A: K.32 3 PLIP interactions: 3 interactions with chain A Water bridges: A:L.30, A:L.30, A:K.32

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.5: 3 residues within 4Å: Chain B: T.30, T.31, N.32 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.32, B:N.32

1 x P33: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL(Non-covalent)

P33.6: 13 residues within 4Å: Chain A: Y.31, D.33, Y.37, F.96, V.97, F.101 Chain B: A.34, T.36, W.48, Y.51, R.53, Y.99, Y.101 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:T.36, B:T.36 Water bridges: A:D.33

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, X. et al., Complete reaction cycle of a cocaine catalytic antibody at atomic resolution. Structure (2006)

Release Date

2006-02-14

Peptides

Antibody 7A1 FAB': A
Antibody 7A1 FAB': B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

Antibody 7A1 FAB'

Antibody 7A1 FAB'

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