SMTL ID : 2ak5.1

beta PIX-SH3 complexed with a Cbl-b peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-tetramer

Ligands

2 x ARG- PRO- PRO- LYS- PRO- ARG- PRO- ARG: 8-residue peptide from a signal transduction protein CBL-B(Non-covalent)

ARG-PRO-PRO-LYS-PRO-ARG-PRO-ARG.1: 18 residues within 4Å: Chain B: F.13, D.21, E.22, G.39, G.40, W.41, W.52, N.56, Y.57 Chain C: K.12, N.19, D.21, E.22, W.41, W.52, P.54, N.56, Y.57 21 PLIP interactions: 12 interactions with chain C, 9 interactions with chain B Hydrophobic interactions: C:P.54, C:Y.57, B:F.13, B:Y.57 Hydrogen bonds: C:K.12, C:K.12, C:N.56, B:G.39, B:W.52, B:N.56, B:Y.57 Water bridges: C:Q.16, C:T.18, C:E.22, C:E.22, B:W.41 Salt bridges: C:D.21, C:E.22, B:D.21, B:E.22 pi-Cation interactions: C:W.41 ARG-PRO-PRO-LYS-PRO-ARG-PRO-ARG.2: 9 residues within 4Å: Chain D: F.13, D.21, E.22, G.39, G.40, W.41, W.52, N.56, Y.57 9 PLIP interactions: 9 interactions with chain D Hydrophobic interactions: D:F.13, D:Y.57 Hydrogen bonds: D:G.39, D:G.39, D:W.52, D:N.56 Water bridges: D:W.41 Salt bridges: D:D.21, D:E.22

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jozic, D. et al., Cbl promotes clustering of endocytic adaptor proteins. Nat.Struct.Mol.Biol. (2005)

Release Date

2005-10-11

Peptides

Rho guanine nucleotide exchange factor 7: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Rho guanine nucleotide exchange factor 7