SMTL ID : 2alx.1

Ribonucleotide Reductase R2 from Escherichia coli in space group P6(1)22

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

4 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 6 residues within 4Å: Chain A: D.85, E.116, H.119, F.209, E.239 Ligands: MN.2 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.85, A:D.85, A:E.116, A:H.119, A:E.239 MN.2: 6 residues within 4Å: Chain A: W.112, E.116, E.205, E.239, H.242 Ligands: MN.1 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.116, A:E.205, A:E.205, A:E.239, A:H.242 MN.7: 6 residues within 4Å: Chain B: D.85, E.116, H.119, F.209, E.239 Ligands: MN.8 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:D.85, B:D.85, B:E.116, B:H.119, B:E.239 MN.8: 6 residues within 4Å: Chain B: W.112, E.116, E.205, E.239, H.242 Ligands: MN.7 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:E.116, B:E.205, B:E.205, B:E.239, B:H.242

8 x HG: MERCURY (II) ION(Non-covalent)

HG.3: 4 residues within 4Å: Chain A: Y.157, Y.158, C.197, V.201 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:C.197 HG.4: 5 residues within 4Å: Chain A: N.77, V.211, C.215, L.291, L.305 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:C.215 HG.5: 3 residues within 4Å: Chain A: C.306, Q.307, E.310 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.310 HG.6: 4 residues within 4Å: Chain A: Y.195, M.199, C.269, C.273 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:C.273 HG.9: 4 residues within 4Å: Chain B: Y.157, Y.158, C.197, V.201 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:C.197 HG.10: 5 residues within 4Å: Chain B: N.77, V.211, C.215, L.291, L.305 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:C.215 HG.11: 3 residues within 4Å: Chain B: C.306, Q.307, E.310 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:E.310 HG.12: 4 residues within 4Å: Chain B: Y.195, M.199, C.269, C.273 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:C.273

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sommerhalter, M. et al., Structure of Escherichia coli ribonucleotide reductase R2 in space group P6122. Acta Crystallogr.,Sect.D (2005)

Release Date

2005-11-29

Peptides

Ribonucleoside-diphosphate reductase 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Ribonucleoside-diphosphate reductase 1