SMTL ID : 2ani.1

Crystal structure of the F127Y mutant of Ribonucleotide Reductase R2 from Chlamydia trachomatis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

4 x FE: FE (III) ION(Non-covalent)

FE.1: 5 residues within 4Å: Chain A: E.120, E.193, E.227, H.230 Ligands: FE.2 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.120, A:E.193, A:E.227, A:H.230, H2O.14 FE.2: 6 residues within 4Å: Chain A: E.89, E.120, H.123, F.197, E.227 Ligands: FE.1 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.89, A:E.120, A:H.123, A:E.227, H2O.14 FE.4: 5 residues within 4Å: Chain B: E.120, E.193, E.227, H.230 Ligands: FE.5 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.120, B:E.193, B:E.227, B:H.230, H2O.27 FE.5: 6 residues within 4Å: Chain B: E.89, E.120, H.123, F.197, E.227 Ligands: FE.4 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.89, B:E.120, B:H.123, B:E.227, H2O.28

2 x PB: LEAD (II) ION(Non-covalent)

PB.3: 1 residues within 4Å: Chain A: E.270 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.270, A:E.270, H2O.14 PB.6: 1 residues within 4Å: Chain B: E.270 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.270, B:E.270, H2O.27

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Voevodskaya, N. et al., Structure of the high-valent FeIIIFeIV state in ribonucleotide reductase (RNR) of Chlamydia trachomatis--combined EPR, 57Fe-, 1H-ENDOR and X-ray studies. Biochim.Biophys.Acta (2007)

Release Date

2006-07-25

Peptides

Ribonucleoside-diphosphate reductase beta subunit: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Ribonucleoside-diphosphate reductase beta subunit