SMTL ID : 2art.1

Crystal structure of lipoate-protein ligase A bound with lipoyl-AMP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 7 residues within 4Å: Chain A: K.135, T.137, D.138, G.148, A.149 Ligands: LPA.2, AMP.3 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:T.137, A:D.138

1 x LPA: LIPOIC ACID(Non-covalent)

LPA.2: 15 residues within 4Å: Chain A: L.18, Y.39, I.46, R.72, G.77, V.79, H.81, K.145, G.148, A.149, H.161, A.162, A.163 Ligands: MG.1, AMP.3 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:V.79 Hydrogen bonds: A:G.77 Salt bridges: A:K.135, A:K.145

1 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)

AMP.3: 21 residues within 4Å: Chain A: G.77, A.78, V.79, Y.80, H.81, D.85, P.132, K.135, D.138, K.145, M.147, G.148, A.163, L.165, L.173, L.177, V.179, T.192, V.196 Ligands: MG.1, LPA.2 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:G.77, A:A.78, A:Y.80, A:D.85, A:P.132, A:K.145 Salt bridges: A:K.135, A:K.145

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, D.J. et al., Crystal structure of lipoate-protein ligase A bound with the activated intermediate: insights into interaction with lipoyl domains. J.Biol.Chem. (2005)

Release Date

2005-10-04

Peptides

Lipoate-protein ligase A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Lipoate-protein ligase A

Related Entries With Identical Sequence