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SMTL ID : 2az9.1
HIV-1 Protease NL4-3 1X mutant
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 2.50 Å
Oligo State
homo-dimer
Ligands
2 x
3TL
:
benzyl [(1S,4S,7S,8R,9R,10S,13S,16S)-7,10-dibenzyl-8,9-dihydroxy-1,16-dimethyl-4,13-bis(1-methylethyl)-2,5,12,15,18-pentaoxo-20-phenyl-19-oxa-3,6,11,14,17-pentaazaicos-1-yl]carbamate
(Non-covalent)
3TL.1:
17 residues within 4Å:
Chain A:
D.25
,
G.27
,
A.28
,
D.29
,
M.46
,
I.47
,
G.48
,
G.49
,
I.50
,
F.53
Chain B:
R.8
,
L.23
,
D.25
,
I.50
,
P.81
,
I.84
Ligands:
3TL.2
14
PLIP interactions
:
6 interactions with chain B
,
8 interactions with chain A
Hydrophobic interactions:
B:L.23
,
B:I.50
,
B:P.81
,
B:I.84
,
A:F.53
,
A:F.53
Hydrogen bonds:
B:D.25
,
A:G.27
,
A:D.29
,
A:D.29
,
A:G.48
,
A:G.48
Water bridges:
B:I.50
,
A:I.50
3TL.2:
17 residues within 4Å:
Chain A:
R.8
,
L.23
,
D.25
,
I.50
,
P.81
,
I.84
Chain B:
D.25
,
G.27
,
A.28
,
D.29
,
M.46
,
I.47
,
G.48
,
G.49
,
I.50
,
F.53
Ligands:
3TL.1
15
PLIP interactions
:
6 interactions with chain A
,
9 interactions with chain B
Hydrophobic interactions:
A:L.23
,
A:I.50
,
A:P.81
,
A:I.84
,
B:F.53
,
B:F.53
Hydrogen bonds:
A:D.25
,
B:G.27
,
B:D.29
,
B:D.29
,
B:D.29
,
B:G.48
,
B:G.48
Water bridges:
A:I.50
,
B:I.50
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Heaslet, H. et al., Structural Insights into the Mechanisms of Drug Resistance in HIV-1 Protease NL4-3. J.Mol.Biol. (2006)
Release Date
2006-02-28
Peptides
PROTEASE RETROPEPSIN:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
A
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