SMTL ID : 2b3d.1

Crystal structure of Modulator of Drug activity B in complex with flavin adenine dinucleotide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 23 residues within 4Å: Chain A: F.24, A.25, H.26, S.27, N.28, G.29, Q.30, L.31, N.32, T.34, P.79, G.80, W.81, W.82, M.83, T.135, W.136, N.137, A.138, V.182 Chain B: D.94, T.98, Y.119 26 PLIP interactions: 24 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:F.24, A:F.24, A:W.81, A:W.81 Hydrogen bonds: A:S.27, A:N.28, A:G.29, A:Q.30, A:Q.30, A:L.31, A:N.32, A:T.34, A:G.80, A:G.80, A:W.82, A:M.83, A:T.135, A:T.135, A:N.137, A:A.138, B:Y.119, B:Y.119 Water bridges: A:K.22, A:N.28, A:Q.30 pi-Stacking: A:W.81 FAD.2: 22 residues within 4Å: Chain A: T.98, Y.119 Chain B: F.24, H.26, S.27, N.28, G.29, Q.30, L.31, N.32, T.34, P.79, G.80, W.81, W.82, M.83, T.135, W.136, N.137, A.138, V.182, I.183 26 PLIP interactions: 23 interactions with chain B, 3 interactions with chain A Hydrophobic interactions: B:F.24, B:W.81, A:T.98 Hydrogen bonds: B:S.27, B:N.28, B:Q.30, B:Q.30, B:L.31, B:N.32, B:T.34, B:T.34, B:G.80, B:G.80, B:W.82, B:M.83, B:T.135, B:T.135, B:N.137, B:A.138, A:Y.119, A:Y.119 Water bridges: B:K.22, B:N.28, B:Q.30, B:V.182 pi-Stacking: B:W.81

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Adams, M.A. et al., Modulator of drug activity B from Escherichia coli: crystal structure of a prokaryotic homologue of DT-diaphorase. J.Mol.Biol. (2006)

Release Date

2006-08-29

Peptides

Modulator of drug activity B: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Modulator of drug activity B

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