SMTL ID : 2b4f.1

Structure Of A Cold-Adapted Family 8 Xylanase in complex with substrate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

2 x XYP- XYP- XYP- XYP- XYP: beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose

XYP-XYP-XYP-XYP-XYP.1: 18 residues within 4Å: Chain A: R.76, E.78, W.124, D.138, G.140, P.141, A.142, F.191, S.192, Y.194, Y.203, F.268, F.280, D.281, R.284, Q.327, Y.380, Y.381 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.138 Water bridges: A:D.138, A:G.140 XYP-XYP-XYP-XYP-XYP.2: 12 residues within 4Å: Chain A: W.249, N.250, N.307, K.308, G.311, F.312, Y.315, Y.331, G.332, G.333, T.356, N.357 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.332 Water bridges: A:G.332

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

De Vos, D. et al., Oligosaccharide binding in family 8 glycosidases: crystal structures of active-site mutants of the beta-1,4-xylanase pXyl from Pseudoaltermonas haloplanktis TAH3a in complex with substrate and product. Biochemistry (2006)

Release Date

2006-09-05

Peptides

endo-1,4-beta-xylanase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

endo-1,4-beta-xylanase

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