SMTL ID : 2b8l.1

Crystal structure of human beta secretase complexed with inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x 5HA: N-[(1S,2R)-1-BENZYL-3-(CYCLOPROPYLAMINO)-2-HYDROXYPROPYL]-5-[METHYL(METHYLSULFONYL)AMINO]-N'-[(1R)-1-PHENYLETHYL]ISOPHTHALAMIDE(Non-covalent)

5HA.1: 27 residues within 4Å: Chain A: G.31, Q.32, G.33, Y.34, L.50, D.52, G.54, S.55, Y.91, T.92, Q.93, F.128, I.130, W.135, I.138, Y.218, I.246, D.248, S.249, G.250, T.251, T.252, N.253, R.255, R.327, S.345, A.355 27 PLIP interactions: 27 interactions with chain A Hydrophobic interactions: A:Y.34, A:L.50, A:L.50, A:Y.91, A:Y.91, A:Q.93, A:F.128, A:I.130, A:W.135, A:Y.218, A:I.246, A:A.355 Hydrogen bonds: A:G.54, A:G.54, A:T.92, A:T.92, A:Q.93, A:Q.93, A:G.250, A:G.250, A:T.252, A:T.252, A:N.253, A:S.345 Water bridges: A:T.251, A:R.255 pi-Stacking: A:Y.91

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stachel, S.J. et al., Conformationally biased P3 amide replacements of beta-secretase inhibitors. Bioorg.Med.Chem.Lett. (2006)

Release Date

2005-10-18

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1

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