SMTL ID : 2bba.1

Crystal Structure and Thermodynamic Characterization of the EphB4 Receptor in Complex with an ephrin-B2 Antagonist Peptide Reveals the Determinants for Receptor Specificity.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

hetero-1-1-mer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: K.13, T.78, R.80, H.180 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.78 Salt bridges: A:K.13, A:R.80, A:H.180 SO4.2: 3 residues within 4Å: Chain A: E.133, H.134, K.147 5 PLIP interactions: 5 interactions with chain A Water bridges: A:L.135, A:L.135, A:L.135 Salt bridges: A:H.134, A:K.147

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chrencik, J.E. et al., Structure and thermodynamic characterization of the EphB4/Ephrin-B2 antagonist peptide complex reveals the determinants for receptor specificity. Structure (2006)

Release Date

2006-07-18

Peptides

Ephrin type-B receptor 4: A
Agonist peptide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
P

Ephrin type-B receptor 4

Agonist peptide