- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
FAD.1: 35 residues within 4Å:- Chain A: V.41, G.42, N.44, H.45, A.46, F.67, D.68, Q.69, N.70, G.77, C.78, M.80, S.113, P.114, V.115, A.144, T.145, G.146, S.147, V.176, K.177, Y.204, I.205, F.289, L.295, G.325, D.326, A.342, L.343, A.344, S.345, A.347
- Chain B: F.470, L.471, P.472
30 PLIP interactions:28 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:I.205, A:I.205, A:I.205, A:F.289
- Hydrogen bonds: A:N.44, A:A.46, A:Q.69, A:N.70, A:V.115, A:V.115, A:S.147, A:Y.204, A:D.326, A:A.342, A:A.344, A:S.345, B:F.470
- Water bridges: A:N.44, A:N.44, A:N.44, A:H.45, A:D.68, A:Q.69, A:N.70, A:G.146, A:C.327, A:S.345, B:F.470
- Salt bridges: A:K.177
- pi-Stacking: A:Y.204
FAD.2: 36 residues within 4Å:- Chain A: F.470, L.471, P.472
- Chain B: V.41, G.42, N.44, H.45, A.46, F.67, D.68, Q.69, N.70, G.77, C.78, M.80, S.113, P.114, V.115, A.144, T.145, G.146, S.147, V.176, K.177, Y.204, I.205, F.289, N.292, L.295, G.325, D.326, A.342, L.343, A.344, S.345, A.347
34 PLIP interactions:32 interactions with chain B, 2 interactions with chain A- Hydrophobic interactions: B:I.205, B:I.205, B:I.205
- Hydrogen bonds: B:A.43, B:N.44, B:H.45, B:A.46, B:Q.69, B:Q.69, B:N.70, B:V.115, B:V.115, B:S.147, B:D.326, B:A.342, B:A.344, B:S.345, A:F.470
- Water bridges: B:N.44, B:N.44, B:N.44, B:H.45, B:D.68, B:N.70, B:K.177, B:N.292, B:N.292, B:C.327, B:C.327, B:L.343, B:S.345, A:F.470
- Salt bridges: B:K.177
- pi-Stacking: B:Y.204
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wallen, J.R. et al., Structural Analysis of Streptococcus pyogenes NADH Oxidase: Conformational Dynamics Involved in Formation of the C(4a)-Peroxyflavin Intermediate. Biochemistry (2015)
- Release Date
- 2006-10-31
- Peptides
- NADH Oxidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wallen, J.R. et al., Structural Analysis of Streptococcus pyogenes NADH Oxidase: Conformational Dynamics Involved in Formation of the C(4a)-Peroxyflavin Intermediate. Biochemistry (2015)
- Release Date
- 2006-10-31
- Peptides
- NADH Oxidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B