SMTL ID : 2bel.1 (1 other biounit)

Structure of human 11-beta-hydroxysteroid dehydrogenase in complex with NADP and carbenoxolone

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.11 Å

Oligo State

homo-dimer

Ligands

2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 29 residues within 4Å: Chain A: G.38, A.39, S.40, K.41, G.42, I.43, A.62, R.63, S.64, G.88, T.89, M.90, N.116, H.117, I.118, Y.144, V.165, S.166, S.167, Y.180, K.184, L.212, G.213, L.214, I.215, T.217, T.219, A.220 Ligands: CBO.2 25 PLIP interactions: 25 interactions with chain A Hydrophobic interactions: A:L.212 Hydrogen bonds: A:G.38, A:S.40, A:S.40, A:S.40, A:K.41, A:I.43, A:R.63, A:S.64, A:T.89, A:M.90, A:N.116, A:I.118, A:K.184, A:I.215, A:I.215, A:T.217, A:T.219 Water bridges: A:G.44, A:N.116, A:N.120, A:T.217, A:T.219 Salt bridges: A:K.41, A:R.63 NAP.4: 29 residues within 4Å: Chain B: G.38, A.39, S.40, K.41, G.42, I.43, A.62, R.63, S.64, G.88, T.89, M.90, N.116, H.117, I.118, Y.144, V.165, S.166, S.167, Y.180, K.184, L.212, G.213, L.214, I.215, T.217, T.219, A.220 Ligands: CBO.5 28 PLIP interactions: 28 interactions with chain B Hydrophobic interactions: B:L.212 Hydrogen bonds: B:G.38, B:S.40, B:S.40, B:S.40, B:K.41, B:I.43, B:R.63, B:S.64, B:T.89, B:T.89, B:M.90, B:N.116, B:I.118, B:Y.180, B:K.184, B:I.215, B:I.215, B:T.219 Water bridges: B:G.44, B:S.64, B:S.64, B:T.119, B:T.119, B:T.219, B:T.219 Salt bridges: B:K.41, B:R.63

2 x CBO: CARBENOXOLONE(Non-covalent)

CBO.2: 17 residues within 4Å: Chain A: I.118, T.121, L.123, S.167, L.168, A.169, Y.174, V.177, Y.180, G.213, L.214, T.219, A.223, V.224, H.229, M.230 Ligands: NAP.1 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.123, A:L.168, A:Y.174, A:Y.174, A:V.177, A:Y.180, A:Y.180, A:L.214, A:A.223, A:H.229 Hydrogen bonds: A:L.168, A:A.169, A:L.214, A:M.230 CBO.5: 16 residues within 4Å: Chain B: I.118, T.121, L.123, S.167, L.168, A.169, Y.174, V.177, Y.180, L.212, G.213, L.214, T.219, A.223, V.224 Ligands: NAP.4 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:L.123, B:L.168, B:Y.174, B:Y.174, B:V.177, B:L.214, B:A.223, B:V.224 Hydrogen bonds: B:L.168, B:A.169, B:Y.180, B:L.214 Water bridges: B:G.213

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 4 residues within 4Å: Chain A: G.42, T.217, E.218, K.235 Ligand excluded by PLIP CL.6: 5 residues within 4Å: Chain B: G.42, R.45, T.217, E.218, K.235 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wu, X. et al., The High Resolution Structures of Human, Murine and Guinea Pig 11-Beta-Hydroxysteroid Dehydrogenase Type 1 Reveal Critical Differences in Active Site Architecture. To be Published

Release Date

2004-12-06

Peptides

CORTICOSTEROID 11-BETA-DEHYDROGENASE ISOZYME 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

CORTICOSTEROID 11-BETA-DEHYDROGENASE ISOZYME 1

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