SMTL ID : 2bfn.1

The crystal structure of the complex of the haloalkane dehalogenase LinB with the product of dehalogenation reaction 1,2-dichloropropane.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x D2P: (2S)-2,3-DICHLOROPROPAN-1-OL(Non-covalent)

D2P.1: 11 residues within 4Å: Chain A: N.38, D.108, F.143, P.144, F.151, F.169, L.177, A.247, L.248, H.272, F.273 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.38

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 6 residues within 4Å: Chain A: N.38, W.109, F.169, W.207, P.208, I.211 Ligand excluded by PLIP

3 x CA: CALCIUM ION(Non-covalent)(Non-functional Binders)

CA.3: 2 residues within 4Å: Chain A: Q.165, D.166 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.166, A:D.166, H2O.8 CA.4: 2 residues within 4Å: Chain A: D.149, Q.152 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.149, H2O.8, H2O.8 CA.5: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Minincova, M. et al., Weak Activity of Haloalkane Dehalogenase Linb with 1,2,3-Trichloropropane Revealed by X-Ray Crystallography and Microcalorimetry. Appl.Environ.Microbiol. (2007)

Release Date

2006-06-26

Peptides

HALOGENALKANE DEHALOGENASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

HALOGENALKANE DEHALOGENASE

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