SMTL ID : 2bfw.1

Structure of the C domain of glycogen synthase from Pyrococcus abyssi

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: D.46, R.47, G.48, Q.49 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.47, A:G.48, A:Q.49 SO4.2: 3 residues within 4Å: Chain A: R.44, K.78, G.79 6 PLIP interactions: 6 interactions with chain A Water bridges: A:R.44, A:K.78, A:K.78, A:G.79 Salt bridges: A:R.44, A:K.78 SO4.3: 5 residues within 4Å: Chain A: E.13, R.20, R.23, R.189, K.193 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:R.23 Water bridges: A:E.13, A:R.20, A:R.20, A:R.20, A:R.189 Salt bridges: A:R.20, A:K.193 SO4.4: 5 residues within 4Å: Chain A: I.42, G.43, R.44, K.50 Ligands: ACT.5 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.44

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.5: 8 residues within 4Å: Chain A: I.42, G.43, R.44, G.77, K.78, E.102, M.103 Ligands: SO4.4 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.42 Hydrogen bonds: A:G.43, A:K.78 Water bridges: A:L.104 ACT.6: 3 residues within 4Å: Chain A: N.172, L.175, E.179 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.175 Water bridges: A:N.172 Salt bridges: A:K.65

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Horcajada, C. et al., Crystal Structure of an Archaeal Glycogen Synthase: Insights Into Oligomerisation and Substrate Binding of Eukaryotic Glycogen Synthases. J.Biol.Chem. (2006)

Release Date

2005-11-28

Peptides

GLGA GLYCOGEN SYNTHASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GLGA GLYCOGEN SYNTHASE

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