SMTL ID : 2bjj.1

Structure of recombinant human lactoferrin produced in the milk of transgenic cows

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

2 x FE: FE (III) ION(Non-covalent)

FE.1: 5 residues within 4Å: Chain A: D.61, Y.93, Y.193, H.254 Ligands: CO3.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.61, A:Y.93, A:Y.193, A:H.254 FE.2: 5 residues within 4Å: Chain A: D.396, Y.436, Y.529, H.598 Ligands: CO3.4 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.396, A:Y.436, A:Y.529, A:H.598

2 x CO3: CARBONATE ION(Non-functional Binders)

CO3.3: 10 residues within 4Å: Chain A: D.61, Y.93, T.118, R.122, T.123, A.124, G.125, Y.193, H.254 Ligands: FE.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.118, A:R.122, A:A.124, A:G.125 CO3.4: 10 residues within 4Å: Chain A: D.396, Y.436, T.462, R.466, T.467, A.468, G.469, Y.529, H.598 Ligands: FE.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.462, A:A.468, A:G.469

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.5: 4 residues within 4Å: Chain A: Q.111, F.136, L.137, N.138 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.111 NAG.6: 1 residues within 4Å: Chain A: N.479 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Thomassen, E.A.J. et al., The Protein Structure of Recombinant Human Lactoferrin Produced in the Milk of Transgenic Cows Closely Matches the Structure of Human Milk-Derived Lactoferrin. Transgenic Res. (2005)

Release Date

2005-08-01

Peptides

LACTOTRANSFERRIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

LACTOTRANSFERRIN

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