SMTL ID : 2bm3.1

Structure of the Type II cohesin from Clostridium thermocellum SdbA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

4 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.1: 6 residues within 4Å: Chain A: A.37, A.98, I.102, F.150, D.151, G.154 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:A.37, A:I.102, A:F.150 Water bridges: A:G.154 IPA.2: 2 residues within 4Å: Chain A: T.27, R.29 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.27, A:T.27 IPA.3: 1 residues within 4Å: Chain A: A.77 No protein-ligand interaction detected (PLIP) IPA.4: 2 residues within 4Å: Chain A: L.138, P.141 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:P.141 Hydrogen bonds: A:L.138

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Carvalho, A.L. et al., Insights Into the Structural Determinants of Cohesin-Dockerin Specificity Revealed by the Crystal Structure of the Type II Cohesin from Clostridium Thermocellum Sdba. J.Mol.Biol. (2005)

Release Date

2005-03-10

Peptides

SCAFFOLDING DOCKERIN BINDING PROTEIN A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SCAFFOLDING DOCKERIN BINDING PROTEIN A