SMTL ID : 2bt1.1

Epstein Barr Virus dUTPase in complex with a,b-imino dUTP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x DUP: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE(Non-covalent)

DUP.1: 15 residues within 4Å: Chain A: L.60, H.71, G.73, I.74, I.75, D.76, Y.79, L.83, R.84, G.170, R.171, S.172, G.173, Q.213 Ligands: MG.2 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:I.75, A:Y.79 Hydrogen bonds: A:D.76, A:R.84, A:R.84, A:S.172, A:S.172, A:G.173, A:Q.213 Water bridges: A:S.172, A:S.172, A:L.174

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: R.171 Ligands: DUP.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tarbouriech, N. et al., The Monomeric Dutpase from Epstein-Barr Virus Mimics Trimeric Dutpases. Structure (2005)

Release Date

2005-09-15

Peptides

DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE

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