SMTL ID : 2bwj.2 (2 other biounits)

Structure of adenylate kinase 5

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: G.20, P.21, G.22, S.23, G.24, K.25, G.26 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:G.20, A:G.22, A:S.23, A:G.24, A:K.25, A:G.26 Water bridges: A:T.27 SO4.3: 7 residues within 4Å: Chain B: G.20, P.21, G.22, S.23, G.24, K.25, G.26 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:G.22, B:S.23, B:G.24, B:K.25, B:G.26 Water bridges: B:G.20, B:K.25

2 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)

AMP.2: 4 residues within 4Å: Chain A: E.30, H.40, S.42, E.45 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.30, A:E.30, A:S.42 AMP.6: 3 residues within 4Å: Chain B: E.30, H.40, S.42 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.45

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 3 residues within 4Å: Chain A: R.67 Chain B: R.101, Y.157 Ligand excluded by PLIP CL.5: 1 residues within 4Å: Chain B: R.159 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Filippakopoulos, P. et al., Structure of Adenylate Kinase 5. To be Published

Release Date

2005-07-21

Peptides

ADENYLATE KINASE 5: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
F

ADENYLATE KINASE 5

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