SMTL ID : 2bzd.3 (2 other biounits)

Galactose recognition by the carbohydrate-binding module of a bacterial sialidase.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1: 6 residues within 4Å: Chain A: N.482, D.485, N.487, T.490, A.593, E.594 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.485, A:T.490, A:T.490

1 x GAL: beta-D-galactopyranose(Non-covalent)

GAL.2: 6 residues within 4Å: Chain A: E.476, H.493, W.496, R.526, E.532, Y.589 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.476, A:H.493, A:R.526, A:R.526

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: R.22, D.46, R.230, R.296, Y.324 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:R.22, A:R.22, A:D.46, A:R.230, A:R.230, A:R.296, A:R.296 Water bridges: A:Y.324, A:Y.324

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Newstead, S.L. et al., Galactose Recognition by the Carbohydrate-Binding Module of a Bacterial Sialidase. Acta Crystallogr.,Sect.D (2005)

Release Date

2005-08-19

Peptides

BACTERIAL SIALIDASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

BACTERIAL SIALIDASE

Related Entries With Identical Sequence