SMTL ID : 2c4v.1

H. pylori type II DHQase in complex with citrate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x CIT: CITRIC ACID(Non-functional Binders)

CIT.1: 12 residues within 4Å: Chain A: R.17, Y.22, N.76, G.78, A.79, H.82, H.102, L.103, T.104, I.106, R.109, R.113 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:I.106 Hydrogen bonds: A:N.76, A:N.76, A:G.78, A:L.103, A:T.104, A:R.109 Water bridges: A:P.9, A:P.9 Salt bridges: A:R.17, A:H.82, A:H.102, A:R.109, A:R.113, A:R.113 CIT.2: 12 residues within 4Å: Chain B: R.17, Y.22, N.76, G.78, A.79, H.82, H.102, L.103, T.104, I.106, R.109, R.113 17 PLIP interactions: 17 interactions with chain B Hydrophobic interactions: B:I.106 Hydrogen bonds: B:Y.22, B:N.76, B:N.76, B:G.78, B:H.102, B:L.103, B:T.104, B:R.109 Water bridges: B:P.9, B:P.9 Salt bridges: B:R.17, B:H.82, B:H.102, B:R.109, B:R.113, B:R.113

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Robinson, D.A. et al., Crystal Structures of Helicobacter Pylori Type II Dehydroquinase Inhibitor Complexes: New Directions for Inhibitor Design. J.Med.Chem. (2006)

Release Date

2006-02-22

Peptides

3-DEHYDROQUINATE DEHYDRATASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

3-DEHYDROQUINATE DEHYDRATASE

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