SMTL ID : 2c9a.1

Crystal structure of the MAM-Ig module of receptor protein tyrosine phosphatase mu

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- MAN- MAN: alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-MAN-MAN.1: 4 residues within 4Å: Chain A: M.43, N.52, S.54, Y.149 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-FUC.2: 3 residues within 4Å: Chain A: K.70, N.72, W.131 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:W.131

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 3 residues within 4Å: Chain A: P.108, N.111, R.243 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.111, A:R.243

2 x NA: SODIUM ION(Non-functional Binders)

NA.4: 6 residues within 4Å: Chain A: Q.20, S.21, D.24, F.26, N.27, H.63 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.21, A:D.24, A:H.63 NA.5: 3 residues within 4Å: Chain A: L.8, S.47, D.153 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.47, A:D.153

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Aricescu, A.R. et al., Molecular Analysis of Receptor Protein Tyrosine Phosphatase Mu-Mediated Cell Adhesion. Embo J. (2006)

Release Date

2006-01-19

Peptides

RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE MU: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE MU