SMTL ID : 2ce7.2 (1 other biounit)

EDTA treated

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.44 Å

Oligo State

homo-hexamer

Ligands

6 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.278, E.279, H.282, R.303, D.355 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.278, A:H.282, A:D.355, H2O.2 ZN.4: 3 residues within 4Å: Chain B: H.278, H.282, D.355 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.278, B:H.282, B:D.355, B:D.355, H2O.3 ZN.7: 3 residues within 4Å: Chain C: H.278, H.282, D.355 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:H.278, C:H.282, C:D.355, C:D.355, H2O.4 ZN.10: 5 residues within 4Å: Chain D: H.278, E.279, H.282, R.303, D.355 4 PLIP interactions: 3 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:H.278, D:H.282, D:D.355, H2O.5 ZN.13: 3 residues within 4Å: Chain E: H.278, H.282, D.355 5 PLIP interactions: 4 interactions with chain E, 1 Ligand-Water interactions Metal complexes: E:H.278, E:H.282, E:D.355, E:D.355, H2O.7 ZN.16: 3 residues within 4Å: Chain F: H.278, H.282, D.355 5 PLIP interactions: 4 interactions with chain F, 1 Ligand-Water interactions Metal complexes: F:H.278, F:H.282, F:D.355, F:D.355, H2O.8

6 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 17 residues within 4Å: Chain A: D.17, V.18, G.19, P.57, P.58, G.59, T.60, G.61, K.62, T.63, L.64, I.194, H.198, G.222, A.223, E.226 Ligands: MG.3 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:G.19, A:G.59, A:T.60, A:T.60, A:G.61, A:K.62, A:T.63, A:T.63, A:T.63, A:L.64 Water bridges: A:K.62, A:K.62, A:K.62, A:T.63 Salt bridges: A:K.62 ADP.5: 17 residues within 4Å: Chain B: D.17, V.18, G.19, P.57, P.58, G.59, T.60, G.61, K.62, T.63, L.64, I.194, H.198, G.222, A.223, E.226 Ligands: MG.6 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:G.19, B:G.59, B:T.60, B:T.60, B:G.61, B:K.62, B:T.63, B:T.63, B:L.64 Salt bridges: B:K.62 ADP.8: 15 residues within 4Å: Chain C: G.19, P.57, P.58, G.59, T.60, G.61, K.62, T.63, L.64, I.194, H.198, G.222, A.223, E.226 Ligands: MG.9 10 PLIP interactions: 10 interactions with chain C Hydrogen bonds: C:G.19, C:G.59, C:T.60, C:T.60, C:G.61, C:K.62, C:T.63, C:L.64, C:E.226 Salt bridges: C:K.62 ADP.11: 17 residues within 4Å: Chain D: D.17, V.18, G.19, P.57, P.58, G.59, T.60, G.61, K.62, T.63, L.64, I.194, H.198, G.222, A.223, E.226 Ligands: MG.12 18 PLIP interactions: 18 interactions with chain D Hydrogen bonds: D:G.19, D:G.59, D:T.60, D:T.60, D:T.60, D:G.61, D:K.62, D:T.63, D:T.63, D:L.64, D:E.226 Water bridges: D:K.62, D:K.62, D:K.62, D:T.63, D:T.63, D:T.63 Salt bridges: D:K.62 ADP.14: 17 residues within 4Å: Chain E: D.17, V.18, G.19, P.57, P.58, G.59, T.60, G.61, K.62, T.63, L.64, I.194, H.198, G.222, A.223, E.226 Ligands: MG.15 11 PLIP interactions: 11 interactions with chain E Hydrogen bonds: E:G.19, E:G.59, E:T.60, E:T.60, E:T.60, E:G.61, E:K.62, E:T.63, E:L.64, E:E.226 Salt bridges: E:K.62 ADP.17: 15 residues within 4Å: Chain F: G.19, P.57, P.58, G.59, T.60, G.61, K.62, T.63, L.64, I.194, H.198, G.222, A.223, E.226 Ligands: MG.18 10 PLIP interactions: 10 interactions with chain F Hydrogen bonds: F:G.19, F:G.59, F:T.60, F:T.60, F:G.61, F:K.62, F:T.63, F:T.63, F:L.64 Salt bridges: F:K.62

6 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)

MG.3: 2 residues within 4Å: Chain A: T.63 Ligands: ADP.2 No protein-ligand interaction detected (PLIP) MG.6: 1 residues within 4Å: Ligands: ADP.5 No protein-ligand interaction detected (PLIP) MG.9: 1 residues within 4Å: Ligands: ADP.8 No protein-ligand interaction detected (PLIP) MG.12: 2 residues within 4Å: Chain D: T.63 Ligands: ADP.11 No protein-ligand interaction detected (PLIP) MG.15: 1 residues within 4Å: Ligands: ADP.14 No protein-ligand interaction detected (PLIP) MG.18: 1 residues within 4Å: Ligands: ADP.17 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bieniossek, C. et al., The Molecular Architecture of the Metalloprotease Ftsh. Proc.Natl.Acad.Sci.USA (2006)

Release Date

2006-02-09

Peptides

CELL DIVISION PROTEIN FTSH: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

C
F

D
D

E
E

F
F

CELL DIVISION PROTEIN FTSH

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