SMTL ID : 2ckl.1

Ring1b-Bmi1 E3 catalytic domain structure

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.18, C.21, C.39, C.42 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.18, A:C.21, A:C.39, A:C.42 ZN.2: 4 residues within 4Å: Chain A: C.34, H.36, C.53, C.56 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.34, A:H.36, A:C.53, A:C.56 ZN.4: 4 residues within 4Å: Chain B: C.73, H.75, C.93, C.96 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.73, B:H.75, B:C.93, B:C.96 ZN.5: 4 residues within 4Å: Chain B: C.57, C.60, C.78, C.81 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.57, B:C.60, B:C.78, B:C.81

2 x IOD: IODIDE ION(Non-functional Binders)

IOD.3: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.6: 1 residues within 4Å: Chain B: L.86 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Buchwald, G. et al., Structure and E3-Ligase Activity of the Ring-Ring Complex of Polycomb Proteins Bmi1 and Ring1B. Embo J. (2006)

Release Date

2006-05-11

Peptides

POLYCOMB GROUP RING FINGER PROTEIN 4: A
UBIQUITIN LIGASE PROTEIN RING2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

POLYCOMB GROUP RING FINGER PROTEIN 4

UBIQUITIN LIGASE PROTEIN RING2