SMTL ID : 2cnm.3 (2 other biounits)

RimI - Ribosomal S18 N-alpha-protein acetyltransferase in complex with a bisubstrate inhibitor (Cterm-Arg-Arg-Phe-Tyr-Arg-Ala-N-alpha- acetyl-S-CoA).

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x ACE- ALA- ARG- TYR- PHE- ARG- ARG: 30S RIBOSOMAL PROTEIN S18(Non-covalent)

ACE-ALA-ARG-TYR-PHE-ARG-ARG.1: 14 residues within 4Å: Chain A: W.27, S.28, T.31, N.35, T.65, F.67, N.68, I.69, E.103, Y.115, Y.129, Y.130, P.131 Ligands: COA.2 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:I.69

1 x COA: COENZYME A(Non-covalent)

COA.2: 22 residues within 4Å: Chain A: A.22, H.23, I.69, A.70, V.71, Q.76, R.77, R.78, G.79, L.80, G.81, R.82, E.103, V.104, N.108, A.110, A.111, A.113, L.114, Y.115 Ligands: ACE-ALA-ARG-TYR-PHE-ARG-ARG.1, ACE-ALA-ARG-TYR-PHE-ARG-ARG.1 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:V.71, A:A.111 Hydrogen bonds: A:I.69, A:V.71, A:Q.76, A:R.77, A:R.77, A:G.79, A:G.79, A:L.80, A:G.81, A:R.82, A:N.108 Salt bridges: A:R.77, A:R.82 pi-Cation interactions: A:R.77, A:R.77

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vetting, M.W. et al., Crystal Structure of Rimi from Salmonella Typhimurium Lt2, the Gnat Responsible for N{Alpha}- Acetylation of Ribosomal Protein S18. Protein Sci. (2008)

Release Date

2007-05-22

Peptides

MODIFICATION OF 30S RIBOSOMAL SUBUNIT PROTEIN S18: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

MODIFICATION OF 30S RIBOSOMAL SUBUNIT PROTEIN S18

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