SMTL ID : 2d0n.1

Crystal structure of the C-terminal SH3 domain of the adaptor protein GADS in complex with SLP-76 motif peptide reveals a unique SH3-SH3 interaction

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.57 Å

Oligo State

homo-dimer

Ligands

2 x PRO- SER- ILE- ASP- ARG- SER- THR- LYS- PRO: SLP-76 binding peptide(Non-covalent)

PRO-SER-ILE-ASP-ARG-SER-THR-LYS-PRO.1: 15 residues within 4Å: Chain A: Y.9, F.11, E.12, L.14, E.15, D.17, E.18, N.34, S.36, W.37, L.48, Y.53 Chain B: E.28, L.30, R.41 22 PLIP interactions: 17 interactions with chain A, 5 interactions with chain B Hydrophobic interactions: A:Y.9, A:F.11, A:W.37, A:W.37, A:W.37, A:L.48, A:Y.53, B:L.30 Hydrogen bonds: A:E.12, A:L.14, A:D.17, A:E.18, A:S.36, A:W.37 Water bridges: A:N.34, A:W.37, A:N.52, B:R.41, B:R.41, B:R.41 Salt bridges: A:E.18, B:R.41 PRO-SER-ILE-ASP-ARG-SER-THR-LYS-PRO.2: 13 residues within 4Å: Chain A: R.41 Chain B: F.11, E.12, L.14, E.15, D.17, E.18, N.34, S.36, W.37, L.48, N.52, Y.53 22 PLIP interactions: 17 interactions with chain B, 5 interactions with chain A Hydrophobic interactions: B:F.11, B:W.37, B:W.37, B:L.48, B:Y.53 Hydrogen bonds: B:E.12, B:D.17, B:E.18, B:N.34, B:S.36, B:W.37, B:N.52 Water bridges: B:W.37, B:Y.53, B:Y.53, A:S.2, A:R.41, A:R.41, A:R.41 Salt bridges: B:E.15, B:E.18, A:R.41

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dimasi, N., Crystal structure of the C-terminal SH3 domain of the adaptor protein GADS in complex with SLP-76 motif peptide reveals a unique SH3-SH3 interaction. Int.J.Biochem.Cell Biol. (2007)

Release Date

2005-08-23

Peptides

GRB2-related adaptor protein 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

GRB2-related adaptor protein 2