- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.63 Å
- Oligo State
- homo-10-mer
- Ligands
- 30 x MN: MANGANESE (II) ION(Non-covalent)
- 10 x P3S: L-METHIONINE-S-SULFOXIMINE PHOSPHATE(Non-covalent)
P3S.4: 19 residues within 4Å:- Chain A: E.129, E.131, Y.158, E.192, E.199, N.244, G.245, H.249, R.291, E.297, T.298, R.311, E.330, R.332
- Chain B: D.56
- Ligands: MN.1, MN.2, MN.3, ADP.5
11 PLIP interactions:11 interactions with chain A- Hydrogen bonds: A:E.131, A:N.244, A:G.245, A:G.247, A:R.311, A:R.316, A:R.332, A:R.332
- Water bridges: A:G.245
- Salt bridges: A:H.249, A:R.291
P3S.9: 21 residues within 4Å:- Chain B: E.129, E.131, E.192, E.199, N.244, G.245, A.246, G.247, H.249, R.291, E.297, T.298, R.311, R.316, E.330, R.332
- Chain C: D.56
- Ligands: MN.6, MN.7, MN.8, ADP.10
13 PLIP interactions:12 interactions with chain B, 1 interactions with chain C- Hydrogen bonds: B:E.131, B:N.244, B:G.245, B:G.247, B:R.311, B:R.316, B:R.332, B:R.332, C:D.56
- Water bridges: B:Q.197, B:G.245
- Salt bridges: B:H.249, B:R.291
P3S.14: 21 residues within 4Å:- Chain C: E.129, E.131, Y.158, E.192, E.199, N.244, G.245, G.247, H.249, R.291, E.297, T.298, R.311, R.316, E.330, R.332
- Chain E: D.56
- Ligands: MN.11, MN.12, MN.13, ADP.15
10 PLIP interactions:9 interactions with chain C, 1 interactions with chain E- Hydrogen bonds: C:E.131, C:N.244, C:G.245, C:R.311, C:R.316, C:R.332, C:R.332, E:D.56
- Salt bridges: C:H.249, C:R.291
P3S.19: 18 residues within 4Å:- Chain A: D.56
- Chain D: E.129, E.131, E.192, E.199, G.245, A.246, G.247, H.249, R.291, E.297, R.311, E.330, R.332
- Ligands: MN.16, MN.17, MN.18, ADP.20
11 PLIP interactions:11 interactions with chain D- Hydrogen bonds: D:E.131, D:G.245, D:G.247, D:R.311, D:R.332, D:R.332
- Water bridges: D:Q.197, D:G.245, D:G.245
- Salt bridges: D:H.249, D:R.291
P3S.24: 22 residues within 4Å:- Chain D: D.56
- Chain E: E.129, E.131, Y.158, E.192, V.193, E.199, N.244, G.245, A.246, G.247, H.249, R.291, E.297, T.298, R.311, E.330, R.332
- Ligands: MN.21, MN.22, MN.23, ADP.25
11 PLIP interactions:11 interactions with chain E- Hydrogen bonds: E:E.131, E:N.244, E:G.245, E:G.247, E:R.311, E:R.316, E:R.332, E:R.332
- Water bridges: E:G.245
- Salt bridges: E:H.249, E:R.291
P3S.29: 19 residues within 4Å:- Chain F: E.129, E.131, Y.158, E.192, E.199, G.245, G.247, H.249, R.291, E.297, T.298, R.311, E.330, R.332
- Chain G: D.56
- Ligands: MN.26, MN.27, MN.28, ADP.30
9 PLIP interactions:9 interactions with chain F- Hydrogen bonds: F:E.131, F:G.245, F:G.247, F:R.311, F:R.332, F:R.332
- Water bridges: F:N.244
- Salt bridges: F:H.249, F:R.291
P3S.34: 19 residues within 4Å:- Chain G: E.129, E.131, E.192, E.199, N.244, G.245, G.247, H.249, R.291, E.297, T.298, R.311, E.330, R.332
- Chain H: D.56
- Ligands: MN.31, MN.32, MN.33, ADP.35
11 PLIP interactions:10 interactions with chain G, 1 interactions with chain H- Hydrogen bonds: G:E.131, G:G.245, G:G.247, G:R.311, G:R.332, G:R.332, H:D.56
- Water bridges: G:Q.197, G:G.245
- Salt bridges: G:H.249, G:R.291
P3S.39: 19 residues within 4Å:- Chain H: E.129, E.131, E.192, E.199, N.244, G.245, G.247, H.249, R.291, E.297, T.298, R.311, E.330, R.332
- Chain J: D.56
- Ligands: MN.36, MN.37, MN.38, ADP.40
10 PLIP interactions:9 interactions with chain H, 1 interactions with chain J- Hydrogen bonds: H:E.131, H:N.244, H:G.245, H:R.311, H:R.332, H:R.332, J:D.56
- Water bridges: H:G.245
- Salt bridges: H:H.249, H:R.291
P3S.44: 21 residues within 4Å:- Chain F: D.56
- Chain I: E.129, E.131, Y.158, E.192, E.199, N.244, G.245, G.247, H.249, R.291, E.297, T.298, R.311, R.316, E.330, R.332
- Ligands: MN.41, MN.42, MN.43, ADP.45
12 PLIP interactions:12 interactions with chain I- Hydrogen bonds: I:E.131, I:N.244, I:G.245, I:G.247, I:R.311, I:R.316, I:R.332, I:R.332
- Water bridges: I:Y.158, I:G.245
- Salt bridges: I:H.249, I:R.291
P3S.49: 21 residues within 4Å:- Chain I: D.56
- Chain J: E.129, E.131, Y.158, E.192, E.199, N.244, G.245, G.247, H.249, R.291, E.297, T.298, R.311, R.316, E.330, R.332
- Ligands: MN.46, MN.47, MN.48, ADP.50
13 PLIP interactions:12 interactions with chain J, 1 interactions with chain I- Hydrogen bonds: J:E.131, J:N.244, J:G.245, J:R.311, J:R.316, J:R.332, J:R.332
- Water bridges: J:Q.197, J:G.245, J:G.245, I:D.56
- Salt bridges: J:H.249, J:R.291
- 10 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
ADP.5: 19 residues within 4Å:- Chain A: W.125, G.127, E.129, S.187, E.199, Q.201, V.202, G.203, P.204, N.251, Y.252, S.253, R.311, R.316, Y.328, E.330
- Ligands: MN.1, MN.2, P3S.4
15 PLIP interactions:15 interactions with chain A- Hydrogen bonds: A:S.187, A:S.187, A:N.251, A:S.253, A:S.253
- Water bridges: A:Q.201, A:Q.201, A:R.311, A:R.316, A:R.316, A:R.316, A:R.316, A:Y.328
- Salt bridges: A:R.311, A:R.316
ADP.10: 18 residues within 4Å:- Chain B: W.125, G.127, E.129, S.187, E.199, Q.201, V.202, G.203, P.204, N.251, Y.252, S.253, R.316, Y.328, E.330
- Ligands: MN.6, MN.7, P3S.9
12 PLIP interactions:12 interactions with chain B- Hydrogen bonds: B:S.187, B:S.187, B:N.251, B:S.253, B:S.253
- Water bridges: B:N.190, B:N.190, B:R.316, B:R.316
- Salt bridges: B:R.311, B:R.316
- pi-Stacking: B:Y.328
ADP.15: 19 residues within 4Å:- Chain C: W.125, Y.126, G.127, E.129, S.187, E.199, Q.201, G.203, P.204, N.251, Y.252, S.253, R.311, R.316, Y.328, E.330
- Ligands: MN.11, MN.12, P3S.14
7 PLIP interactions:7 interactions with chain C- Hydrogen bonds: C:S.187, C:N.251, C:S.253, C:S.253
- Water bridges: C:R.316
- Salt bridges: C:R.311, C:R.316
ADP.20: 20 residues within 4Å:- Chain D: W.125, Y.126, G.127, E.129, S.187, E.199, Q.201, V.202, G.203, P.204, N.251, Y.252, S.253, R.311, R.316, Y.328, E.330
- Ligands: MN.16, MN.17, P3S.19
10 PLIP interactions:10 interactions with chain D- Hydrogen bonds: D:S.187, D:S.187, D:N.251, D:S.253, D:S.253
- Water bridges: D:Q.201, D:Q.201, D:R.311
- Salt bridges: D:R.311, D:R.316
ADP.25: 19 residues within 4Å:- Chain E: W.125, Y.126, G.127, E.129, S.187, E.199, Q.201, V.202, G.203, P.204, N.251, S.253, R.311, R.316, Y.328, E.330
- Ligands: MN.21, MN.22, P3S.24
9 PLIP interactions:7 interactions with chain E, 2 interactions with chain D- Hydrogen bonds: E:S.187, E:V.202, E:N.251, E:S.253, E:S.253
- Salt bridges: E:R.311, E:R.316
- Water bridges: D:N.54, D:N.54
ADP.30: 20 residues within 4Å:- Chain F: W.125, Y.126, G.127, E.129, S.187, E.199, Q.201, V.202, G.203, P.204, N.251, S.253, R.311, R.316, Y.328, E.330
- Chain G: N.54
- Ligands: MN.26, MN.27, P3S.29
14 PLIP interactions:10 interactions with chain F, 4 interactions with chain G- Hydrogen bonds: F:S.187, F:S.187, F:N.251, F:S.253, F:S.253, G:N.54
- Water bridges: F:N.190, F:N.190, F:R.311, G:K.36
- Salt bridges: F:R.311, F:R.316, G:K.36, G:K.36
ADP.35: 19 residues within 4Å:- Chain G: W.125, G.127, E.129, S.187, E.199, Q.201, V.202, G.203, P.204, N.251, Y.252, S.253, R.311, R.316, Y.328, E.330
- Ligands: MN.31, MN.32, P3S.34
7 PLIP interactions:7 interactions with chain G- Hydrogen bonds: G:S.187, G:S.187, G:N.251, G:S.253, G:S.253
- Salt bridges: G:R.311, G:R.316
ADP.40: 20 residues within 4Å:- Chain H: W.125, Y.126, G.127, E.129, S.187, E.199, Q.201, V.202, G.203, P.204, N.251, S.253, R.311, R.316, Y.328, E.330
- Chain J: N.54
- Ligands: MN.36, MN.37, P3S.39
13 PLIP interactions:12 interactions with chain H, 1 interactions with chain J- Hydrogen bonds: H:S.187, H:S.187, H:N.251, H:S.253, H:S.253, J:N.54
- Water bridges: H:Q.201, H:Q.201, H:R.311, H:R.316, H:R.316
- Salt bridges: H:R.311, H:R.316
ADP.45: 20 residues within 4Å:- Chain I: W.125, Y.126, G.127, E.129, S.187, E.199, Q.201, V.202, G.203, P.204, N.251, Y.252, S.253, R.311, R.316, Y.328, E.330
- Ligands: MN.41, MN.42, P3S.44
12 PLIP interactions:12 interactions with chain I- Hydrogen bonds: I:S.187, I:N.251, I:S.253, I:S.253
- Water bridges: I:G.127, I:Q.201, I:V.202, I:R.311, I:R.316, I:R.316
- Salt bridges: I:R.311, I:R.316
ADP.50: 19 residues within 4Å:- Chain J: W.125, G.127, E.129, S.187, E.199, Q.201, V.202, G.203, P.204, N.251, Y.252, S.253, R.311, R.316, Y.328, E.330
- Ligands: MN.46, MN.47, P3S.49
12 PLIP interactions:11 interactions with chain J, 1 interactions with chain I- Hydrogen bonds: J:S.187, J:N.251, J:S.253, J:S.253
- Water bridges: J:Q.201, J:R.311, J:R.311, J:R.316, J:R.316, I:K.36
- Salt bridges: J:R.311, J:R.316
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Unno, H. et al., Atomic Structure of Plant Glutamine Synthetase: A KEY ENZYME FOR PLANT PRODUCTIVITY. J.Biol.Chem. (2006)
- Release Date
- 2006-07-18
- Peptides
- glutamine synthetase: ABCDEFGHIJ
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
HI
IJ
J
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.63 Å
- Oligo State
- homo-10-mer
- Ligands
- 30 x MN: MANGANESE (II) ION(Non-covalent)
- 10 x P3S: L-METHIONINE-S-SULFOXIMINE PHOSPHATE(Non-covalent)
- 10 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Unno, H. et al., Atomic Structure of Plant Glutamine Synthetase: A KEY ENZYME FOR PLANT PRODUCTIVITY. J.Biol.Chem. (2006)
- Release Date
- 2006-07-18
- Peptides
- glutamine synthetase: ABCDEFGHIJ
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
HI
IJ
J