SMTL ID : 2d5v.2 (1 other biounit)

Crystal structure of HNF-6alpha DNA-binding domain in complex with the TTR promoter

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 6 residues within 4Å: Chain A: A.10, T.11 Chain B: T.5, T.6, G.7 Chain C: R.101 1 PLIP interactions: 1 interactions with chain C Salt bridges: C:R.101

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain B: T.6, G.7 Chain C: H.113, F.144, N.147, A.148, R.151 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:R.151, C:R.151 Water bridges: C:N.147 GOL.3: 3 residues within 4Å: Chain C: D.106, V.107, R.110 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:V.107, C:R.110, C:R.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Iyaguchi, D. et al., DNA recognition mechanism of the ONECUT homeodomain of transcription factor HNF-6. Structure (2007)

Release Date

2006-12-05

Peptides

Hepatocyte nuclear factor 6: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
B

Hepatocyte nuclear factor 6

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