SMTL ID : 2d5w.1 (1 other biounit)

The crystal structure of oligopeptide binding protein from Thermus thermophilus HB8 complexed with pentapeptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

1 x ALA- SER- LYS- PRO- LYS: pentapeptide A(Non-covalent)

ALA-SER-LYS-PRO-LYS.1: 21 residues within 4Å: Chain A: Q.14, N.29, Q.30, A.31, S.34, L.119, N.120, S.272, V.273, R.418, F.447, F.466, A.467, W.468, V.469, S.470, L.478, Q.501, N.552, Y.572, Y.574 26 PLIP interactions: 26 interactions with chain A Hydrophobic interactions: A:L.119, A:F.447, A:A.467, A:W.468, A:V.469, A:Y.572, A:Y.572 Hydrogen bonds: A:Q.14, A:N.29, A:A.31, A:A.31, A:S.272, A:A.467, A:A.467, A:A.467, A:V.469, A:V.469, A:Q.501, A:Q.501, A:N.552 Water bridges: A:S.470, A:S.470, A:N.471, A:R.550, A:R.550 Salt bridges: A:R.418

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Morita, A. et al., The crystal structure of oligopeptide binding protein from Thermus thermophilus HB8 complexed with pentapeptide. To be Published

Release Date

2006-10-17

Peptides

peptide ABC transporter, peptide-binding protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

peptide ABC transporter, peptide-binding protein

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