SMTL ID : 2d81.1

PHB depolymerase (S39A) complexed with R3HB trimer

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.66 Å

Oligo State

monomer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: G.89, Q.90, K.92, N.124 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.124 Water bridges: A:N.121, A:N.121

1 x RB3: (1R)-3-{[(1R)-3-METHOXY-1-METHYL-3-OXOPROPYL]OXY}-1-METHYL-3-OXOPROPYL (3R)-3-HYDROXYBUTANOATE(Non-covalent)

RB3.2: 14 residues within 4Å: Chain A: S.20, Y.56, M.60, T.103, H.135, C.230, L.278, S.279, P.281, N.282, C.284, W.287, V.288, W.290 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:Y.56, A:T.103, A:L.278, A:P.281, A:V.288, A:W.290, A:W.290 Hydrogen bonds: A:Y.56 Salt bridges: A:H.135

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hisano, T. et al., The Crystal Structure of Polyhydroxybutyrate Depolymerase from Penicillium funiculosum Provides Insights into the Recognition and Degradation of Biopolyesters. J.Mol.Biol. (2006)

Release Date

2006-01-31

Peptides

PHB depolymerase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PHB depolymerase