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SMTL ID : 2daa.1
CRYSTALLOGRAPHIC STRUCTURE OF D-AMINO ACID AMINOTRANSFERASE INACTIVATED BY D-CYCLOSERINE
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 2.10 Å
Oligo State
homo-dimer
Ligands
2 x
DCS
:
D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE
(Non-covalent)
DCS.1:
21 residues within 4Å:
Chain A:
Y.31
,
V.33
,
H.47
,
R.50
,
R.138
,
K.145
,
E.177
,
G.178
,
S.179
,
S.180
,
S.181
,
N.182
,
L.201
,
G.203
,
I.204
,
T.205
,
T.239
,
S.240
,
T.241
Chain B:
R.98
,
H.100
15
PLIP interactions
:
2 interactions with chain B
,
13 interactions with chain A
Hydrogen bonds:
B:R.98
,
B:R.98
,
A:Y.31
,
A:K.145
,
A:S.179
,
A:I.204
,
A:T.205
,
A:T.241
Hydrophobic interactions:
A:L.201
Water bridges:
A:K.145
,
A:N.182
,
A:R.206
,
A:T.241
Salt bridges:
A:R.50
,
A:K.145
DCS.2:
20 residues within 4Å:
Chain A:
R.98
,
H.100
Chain B:
Y.31
,
V.33
,
R.50
,
R.138
,
K.145
,
E.177
,
G.178
,
S.179
,
S.180
,
S.181
,
N.182
,
L.201
,
G.203
,
I.204
,
T.205
,
T.239
,
S.240
,
T.241
16
PLIP interactions
:
14 interactions with chain B
,
2 interactions with chain A
Hydrophobic interactions:
B:L.201
Hydrogen bonds:
B:K.145
,
B:S.179
,
B:I.204
,
B:T.205
,
B:T.205
,
B:T.241
,
A:R.98
,
A:R.98
Water bridges:
B:Y.31
,
B:Y.31
,
B:K.145
,
B:R.206
,
B:T.241
Salt bridges:
B:R.50
,
B:K.145
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Peisach, D. et al., D-Cycloserine Inactivation of D-Amino Acid Aminotransferase Leads to a Stable Noncovalent Protein Complex with an Aromatic Cycloserine-Plp Derivative. J.Am.Chem.Soc. (1998)
Release Date
1998-03-18
Peptides
D-AMINO ACID AMINOTRANSFERASE:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
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D-AMINO ACID AMINOTRANSFERASE
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