SMTL ID : 2dap.1

C. GLUTAMICUM DAP DEHYDROGENASE IN COMPLEX WITH DAP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

2 x API: 2,6-DIAMINOPIMELIC ACID(Non-covalent)

API.1: 12 residues within 4Å: Chain A: D.90, W.119, D.120, W.144, S.149, Q.150, G.151, H.152, T.169, R.195, H.244, N.270 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:W.119 Hydrogen bonds: A:D.90, A:D.120, A:S.149, A:Q.150, A:G.151, A:T.169, A:N.270, A:N.270 Water bridges: A:H.152, A:H.152, A:R.195 Salt bridges: A:H.152, A:R.195, A:H.244 API.2: 12 residues within 4Å: Chain B: D.90, W.119, D.120, W.144, S.149, Q.150, G.151, H.152, T.169, R.195, H.244, N.270 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:W.119 Hydrogen bonds: B:D.120, B:S.149, B:Q.150, B:G.151, B:N.270, B:N.270 Water bridges: B:H.152, B:R.195 Salt bridges: B:H.152, B:R.195, B:H.244

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Scapin, G. et al., Substrate and inhibitor binding sites in Corynebacterium glutamicum diaminopimelate dehydrogenase. Biochemistry (1998)

Release Date

1998-04-08

Peptides

DIAMINOPIMELIC ACID DEHYDROGENASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

DIAMINOPIMELIC ACID DEHYDROGENASE

Related Entries With Identical Sequence