SMTL ID : 2ddf.2 (1 other biounit)

Crystal structure of TACE in complex with TAPI-2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.188, H.192, H.198 Ligands: INN.2 5 PLIP interactions: 3 interactions with chain A, 1 Ligand-Ligand interactions, 1 Ligand-Water interactions Metal complexes: A:H.188, A:H.192, A:H.198, INN.2, H2O.6

1 x INN: N-{(2R)-2-[2-(hydroxyamino)-2-oxoethyl]-4-methylpentanoyl}-3-methyl-L-valyl-N-(2-aminoethyl)-L-alaninamide(Non-covalent)

INN.2: 16 residues within 4Å: Chain A: M.128, G.129, T.130, L.131, G.132, N.172, V.185, H.188, E.189, H.192, H.198, Y.219, P.220, I.221, A.222 Ligands: ZN.1 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.185, A:A.222 Hydrogen bonds: A:G.129, A:L.131, A:G.132, A:P.220, A:A.222 Water bridges: A:A.134

1 x IMD: IMIDAZOLE(Non-covalent)

IMD.3: 4 residues within 4Å: Chain A: R.140, A.141, N.142 Ligands: CIT.4 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.141 pi-Cation interactions: A:R.140

1 x CIT: CITRIC ACID(Non-functional Binders)

CIT.4: 5 residues within 4Å: Chain A: R.140, N.142, S.143, H.144 Ligands: IMD.3 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.142, A:N.142 Water bridges: A:H.144 Salt bridges: A:R.140, A:H.144

3 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.5: 2 residues within 4Å: Chain A: L.203, A.204 No protein-ligand interaction detected (PLIP) IPA.6: 4 residues within 4Å: Chain A: L.68, K.69, S.70, N.82 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.70, A:N.82 IPA.7: 4 residues within 4Å: Chain A: I.62, E.63, Q.64, I.65 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:I.62 Hydrogen bonds: A:E.63, A:I.65

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ingram, R.N. et al., Stabilization of the autoproteolysis of TNF-alpha converting enzyme (TACE) results in a novel crystal form suitable for structure-based drug design studies. Protein Eng.Des.Sel. (2006)

Release Date

2006-03-14

Peptides

ADAM 17: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

ADAM 17

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