SMTL ID : 2ddm.1

Crystal Structure of Pyridoxal Kinase from the Escherichia coli PdxK gene at 2.1 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.1: 7 residues within 4Å: Chain A: D.125, Y.136, T.157, N.159, E.162, T.195, G.232 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.136, A:E.162, A:T.195, A:T.195 Water bridges: A:N.159, A:T.195 TRS.2: 7 residues within 4Å: Chain B: D.125, T.157, P.158, N.159, E.162, T.195, G.232 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:N.159, B:E.162, B:T.195 Water bridges: B:G.129, B:E.162, B:T.195

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Safo, M.K. et al., Crystal structure of pyridoxal kinase from the Escherichia coli pdxK gene: implications for the classification of pyridoxal kinases. J.Bacteriol. (2006)

Release Date

2006-08-15

Peptides

Pyridoxine kinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Pyridoxine kinase

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