SMTL ID : 2ddu.2 (1 other biounit)

Crystal structure of the third repeat domain of reelin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

homo-dimer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: R.235, E.237, D.261, R.263, D.374 6 PLIP interactions: 5 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:R.235, A:E.237, A:D.261, A:R.263, A:D.374, H2O.4 CA.4: 5 residues within 4Å: Chain B: R.235, E.237, D.261, R.263, D.374 6 PLIP interactions: 5 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:R.235, B:E.237, B:D.261, B:R.263, B:D.374, H2O.8

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: R.329, L.331 Chain B: R.329 Ligands: CL.5 Ligand excluded by PLIP CL.5: 4 residues within 4Å: Chain A: R.329 Chain B: R.329, L.331 Ligands: CL.2 Ligand excluded by PLIP

2 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 3 residues within 4Å: Chain A: E.330 Chain B: E.330 Ligands: MG.6 No protein-ligand interaction detected (PLIP) MG.6: 3 residues within 4Å: Chain A: E.330 Chain B: E.330 Ligands: MG.3 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nogi, T. et al., Structure of a signaling-competent reelin fragment revealed by X-ray crystallography and electron tomography. Embo J. (2006)

Release Date

2006-09-26

Peptides

reelin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

reelin

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