SMTL ID : 2ddy.1

Solution Structure of Matrilysin (MMP-7) Complexed to Constraint Conformational Sulfonamide Inhibitor

Coordinates

PDB Format Compare

Method

SOLUTION NMR

Oligo State

monomer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 8 residues within 4Å: Chain A: D.76, G.77, G.79, N.80, T.81, L.82, D.99, E.102 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.76, A:D.76, A:G.77, A:T.81, A:E.102 CA.2: 8 residues within 4Å: Chain A: W.10, A.58, D.59, M.61, G.91, L.92, G.93, D.95 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.59, A:G.91, A:G.93, A:D.95, A:D.95

2 x ZN: ZINC ION(Non-covalent)

ZN.3: 6 residues within 4Å: Chain A: H.69, D.71, Y.73, H.84, F.86, H.97 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.69, A:D.71, A:H.84, A:H.97 ZN.4: 5 residues within 4Å: Chain A: H.120, H.124, H.130, M.138 Ligands: MDW.5 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.120, A:H.124, A:H.130

1 x MDW: (1R)-N,6-DIHYDROXY-7-METHOXY-2-[(4-METHOXYPHENYL)SULFONYL]-1,2,3,4-TETRAHYDROISOQUINOLINE-1-CARBOXAMIDE(Non-covalent)

MDW.5: 18 residues within 4Å: Chain A: T.81, L.82, A.83, H.84, A.85, W.104, I.112, N.113, Y.116, A.117, H.120, E.121, H.124, H.130, P.140, T.141, Y.142 Ligands: ZN.4 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.82, A:P.140 Hydrogen bonds: A:L.82, A:A.83, A:A.83, A:H.120, A:E.121 pi-Stacking: A:H.120

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zheng, X.H. et al., Solution Structure of Matrilysin (MMP-7) Complexed to Constraint Conformational Sulfonamide Inhibitor. to be published

Release Date

2007-02-06

Peptides

Matrilysin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Matrilysin