SMTL ID : 2dq3.1

Crystal structure of aq_298

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-dimer

Ligands

2 x SSA: 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE(Non-covalent)

SSA.1: 19 residues within 4Å: Chain A: T.231, E.233, R.262, E.264, I.276, R.277, Q.278, F.281, K.283, E.285, E.349, I.350, S.351, S.352, N.383, G.384, S.385, A.388, R.391 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:T.231, A:E.233, A:R.262, A:Q.278, A:Q.278, A:E.349, A:E.349, A:S.352, A:S.385, A:R.391 Salt bridges: A:R.262 pi-Stacking: A:F.281, A:F.281 SSA.2: 19 residues within 4Å: Chain B: T.231, E.233, R.262, E.264, I.276, R.277, Q.278, F.281, K.283, E.285, E.349, I.350, S.351, S.352, N.383, G.384, S.385, A.388, R.391 14 PLIP interactions: 14 interactions with chain B Hydrogen bonds: B:T.231, B:R.262, B:E.264, B:Q.278, B:K.283, B:E.285, B:E.349, B:E.349, B:E.349, B:S.352, B:S.352, B:R.391 Salt bridges: B:R.262 pi-Stacking: B:F.281

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Itoh, Y. et al., Crystal structure of aq_298. To be Published

Release Date

2007-06-05

Peptides

Seryl-tRNA synthetase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Seryl-tRNA synthetase