SMTL ID : 2dq4.1

Crystal structure of threonine 3-dehydrogenase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-tetramer

Ligands

8 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.38, H.63, E.64, E.148 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.38, A:H.63, A:E.64 ZN.2: 5 residues within 4Å: Chain A: C.93, H.94, C.96, C.99, C.107 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.93, A:C.96, A:C.99, A:C.107 ZN.4: 4 residues within 4Å: Chain B: C.38, H.63, E.64, E.148 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:C.38, B:H.63, B:E.64 ZN.5: 5 residues within 4Å: Chain B: C.93, H.94, C.96, C.99, C.107 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.93, B:C.96, B:C.99, B:C.107 ZN.7: 4 residues within 4Å: Chain C: C.38, H.63, E.64, E.148 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:C.38, C:H.63, C:E.64 ZN.8: 5 residues within 4Å: Chain C: C.93, H.94, C.96, C.99, C.107 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.93, C:C.96, C:C.99, C:C.107 ZN.10: 4 residues within 4Å: Chain D: C.38, H.63, E.64, E.148 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:C.38, D:H.63, D:E.64 ZN.11: 5 residues within 4Å: Chain D: C.93, H.94, C.96, C.99, C.107 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.93, D:C.96, D:C.99, D:C.107

4 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.3: 8 residues within 4Å: Chain A: G.174, P.175, I.176, G.177, F.238, L.261, G.262, I.263 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.174, A:I.176, A:G.177, A:I.263 Water bridges: A:R.201 MES.6: 8 residues within 4Å: Chain B: G.174, P.175, I.176, G.177, F.238, L.261, G.262, I.263 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:I.176, B:G.177, B:I.263 MES.9: 8 residues within 4Å: Chain C: G.174, P.175, I.176, G.177, F.238, L.261, G.262, I.263 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:G.174, C:I.176, C:G.177, C:I.263 Water bridges: C:R.201 MES.12: 8 residues within 4Å: Chain D: G.174, P.175, I.176, G.177, F.238, L.261, G.262, I.263 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:I.176, D:G.177, D:I.263

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Omi, R. et al., Crystal structure of threonine 3-dehydrogenase. To be Published

Release Date

2007-06-12

Peptides

L-threonine 3-dehydrogenase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

L-threonine 3-dehydrogenase

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