SMTL ID : 2dxs.1 (1 other biounit)

Crystal structure of HCV NS5B RNA polymerase complexed with a tetracyclic inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x JTP: N-[(13-CYCLOHEXYL-6,7-DIHYDROINDOLO[1,2-D][1,4]BENZOXAZEPIN-10-YL)CARBONYL]-2-METHYL-L-ALANINE(Non-covalent)

JTP.1: 16 residues within 4Å: Chain A: V.37, L.392, A.393, A.395, A.396, T.399, I.424, L.425, H.428, F.429, L.492, G.493, V.494, P.495, W.500, R.503 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:V.37, A:L.392, A:A.395, A:A.396, A:I.424, A:L.425, A:F.429, A:F.429, A:L.492, A:L.492, A:V.494, A:W.500 Hydrogen bonds: A:R.503, A:R.503 Salt bridges: A:R.503

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ikegashira, K. et al., Discovery of Conformationally Constrained Tetracyclic Compounds as Potent Hepatitis C Virus NS5B RNA Polymerase Inhibitors. J.Med.Chem. (2006)

Release Date

2006-12-26

Peptides

Genome polyprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Genome polyprotein

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