SMTL ID : 2dyt.1

The crystal structure of Saccharomyces cerevisiae Atg3

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: R.61, F.63, L.64, Q.69, A.176, Y.177 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.177, A:Y.177 SO4.2: 5 residues within 4Å: Chain A: S.178, S.180, Y.181, K.185, H.234 6 PLIP interactions: 6 interactions with chain A Water bridges: A:Y.181, A:K.185, A:K.237 Salt bridges: A:K.185, A:H.234, A:K.237

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yamada, Y. et al., The crystal structure of Atg3, an autophagy-related ubiquitin carrier protein (E2) enzyme that mediates Atg8 lipidation. J.Biol.Chem. (2007)

Release Date

2007-01-23

Peptides

Autophagy-related protein 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Autophagy-related protein 3