SMTL ID : 2e0l.1 (2 other biounits)

Mutant Human Ribonuclease 1 (Q28L, R31L, R32L)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

5 x CD: CADMIUM ION(Non-covalent)

CD.1: 1 residues within 4Å: Chain A: E.126 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.126, A:E.126 CD.2: 3 residues within 4Å: Chain A: S.124 Ligands: CL.6, CL.7 No protein-ligand interaction detected (PLIP) CD.3: 3 residues within 4Å: Chain A: S.101 Ligands: CL.8, CL.9 No protein-ligand interaction detected (PLIP) CD.4: 2 residues within 4Å: Chain A: H.120 Ligands: CL.10 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.120, H2O.6 CD.5: 3 residues within 4Å: Chain A: E.50, H.81 Ligands: CL.11 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.50, A:H.81, H2O.1, H2O.5, H2O.5

6 x CL: CHLORIDE ION(Non-functional Binders)

CL.6: 2 residues within 4Å: Ligands: CD.2, CL.7 Ligand excluded by PLIP CL.7: 5 residues within 4Å: Chain A: R.105, V.125, E.126 Ligands: CD.2, CL.6 Ligand excluded by PLIP CL.8: 5 residues within 4Å: Chain A: D.84, R.86, S.101, K.103 Ligands: CD.3 Ligand excluded by PLIP CL.9: 2 residues within 4Å: Chain A: R.86 Ligands: CD.3 Ligand excluded by PLIP CL.10: 4 residues within 4Å: Chain A: H.13, H.120, F.121 Ligands: CD.4 Ligand excluded by PLIP CL.11: 4 residues within 4Å: Chain A: E.50, S.79, H.81 Ligands: CD.5 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yamada, H. et al., Crystal lattice engineering,' an approach to engineer protein crystal contacts by creating intermolecular symmetry: crystallization and structure determination of a mutant human RNase 1 with a hydrophobic interface of leucines. Protein Sci. (2007)

Release Date

2007-08-28

Peptides

Ribonuclease: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ribonuclease

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