SMTL ID : 2e28.1

Crystal structure analysis of pyruvate kinase from Bacillus stearothermophilus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-tetramer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 9 residues within 4Å: Chain A: T.381, V.382, S.383, G.384, K.385, T.386, E.462, T.463, G.464 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:T.381, A:V.382, A:S.383, A:G.384, A:K.385, A:T.386, A:T.386, A:G.464 Water bridges: A:P.380, A:G.457, A:G.457, A:E.462 SO4.2: 9 residues within 4Å: Chain B: T.381, V.382, S.383, G.384, K.385, T.386, E.462, T.463, G.464 12 PLIP interactions: 12 interactions with chain B Hydrogen bonds: B:T.381, B:V.382, B:S.383, B:G.384, B:K.385, B:T.386, B:T.386, B:G.464 Water bridges: B:P.380, B:G.457, B:G.457, B:E.462 SO4.3: 9 residues within 4Å: Chain C: T.381, V.382, S.383, G.384, K.385, T.386, E.462, T.463, G.464 11 PLIP interactions: 11 interactions with chain C Hydrogen bonds: C:V.382, C:S.383, C:G.384, C:K.385, C:T.386, C:T.463, C:G.464 Water bridges: C:P.380, C:T.386, C:G.457, C:E.462 SO4.4: 9 residues within 4Å: Chain D: T.381, V.382, S.383, G.384, K.385, T.386, E.462, T.463, G.464 11 PLIP interactions: 11 interactions with chain D Hydrogen bonds: D:V.382, D:S.383, D:G.384, D:K.385, D:T.386, D:T.463, D:G.464 Water bridges: D:P.380, D:T.386, D:G.457, D:E.462

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Suzuki, K. et al., Crystal structure of pyruvate kinase from Geobacillus stearothermophilus. J.Biochem. (2008)

Release Date

2008-02-05

Peptides

Pyruvate kinase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

Pyruvate kinase