- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-octamer
- Ligands
- 8 x MN: MANGANESE (II) ION(Non-covalent)
- 22 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 7 residues within 4Å:- Chain A: G.102, H.103, S.178, V.179, R.180, Y.182, R.214
Ligand excluded by PLIPSO4.3: 1 residues within 4Å:- Chain A: R.180
Ligand excluded by PLIPSO4.4: 8 residues within 4Å:- Chain A: D.8, N.96, N.100, H.107, S.108, G.109, T.110
- Ligands: MN.1
Ligand excluded by PLIPSO4.8: 8 residues within 4Å:- Chain B: L.101, G.102, H.103, S.178, V.179, R.180, Y.182, R.214
Ligand excluded by PLIPSO4.9: 3 residues within 4Å:- Chain B: R.180, P.204, R.214
Ligand excluded by PLIPSO4.10: 8 residues within 4Å:- Chain B: D.8, N.96, N.100, H.107, S.108, G.109, T.110
- Ligands: MN.7
Ligand excluded by PLIPSO4.15: 7 residues within 4Å:- Chain C: G.102, H.103, S.178, V.179, R.180, Y.182, R.214
Ligand excluded by PLIPSO4.16: 7 residues within 4Å:- Chain C: D.8, N.96, N.100, S.108, G.109, T.110
- Ligands: MN.14
Ligand excluded by PLIPSO4.18: 7 residues within 4Å:- Chain D: G.102, H.103, S.178, V.179, R.180, Y.182, R.214
Ligand excluded by PLIPSO4.19: 2 residues within 4Å:- Chain D: R.180, P.204
Ligand excluded by PLIPSO4.20: 7 residues within 4Å:- Chain D: D.8, N.96, N.100, S.108, G.109, T.110
- Ligands: MN.17
Ligand excluded by PLIPSO4.23: 7 residues within 4Å:- Chain E: G.102, H.103, S.178, V.179, R.180, Y.182, R.214
Ligand excluded by PLIPSO4.24: 1 residues within 4Å:- Chain E: R.180
Ligand excluded by PLIPSO4.25: 8 residues within 4Å:- Chain E: D.8, N.96, N.100, H.107, S.108, G.109, T.110
- Ligands: MN.22
Ligand excluded by PLIPSO4.29: 8 residues within 4Å:- Chain F: L.101, G.102, H.103, S.178, V.179, R.180, Y.182, R.214
Ligand excluded by PLIPSO4.30: 3 residues within 4Å:- Chain F: R.180, P.204, R.214
Ligand excluded by PLIPSO4.31: 8 residues within 4Å:- Chain F: D.8, N.96, N.100, H.107, S.108, G.109, T.110
- Ligands: MN.28
Ligand excluded by PLIPSO4.36: 7 residues within 4Å:- Chain G: G.102, H.103, S.178, V.179, R.180, Y.182, R.214
Ligand excluded by PLIPSO4.37: 7 residues within 4Å:- Chain G: D.8, N.96, N.100, S.108, G.109, T.110
- Ligands: MN.35
Ligand excluded by PLIPSO4.39: 7 residues within 4Å:- Chain H: G.102, H.103, S.178, V.179, R.180, Y.182, R.214
Ligand excluded by PLIPSO4.40: 2 residues within 4Å:- Chain H: R.180, P.204
Ligand excluded by PLIPSO4.41: 7 residues within 4Å:- Chain H: D.8, N.96, N.100, S.108, G.109, T.110
- Ligands: MN.38
Ligand excluded by PLIP- 12 x GOL: GLYCEROL(Non-functional Binders)
GOL.5: 8 residues within 4Å:- Chain A: S.24, G.27, E.28, V.29, F.30, H.64, F.65, P.66
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:G.27, A:V.29, A:H.64
GOL.6: 6 residues within 4Å:- Chain A: A.44, I.45, Q.116, L.119
- Chain B: H.103, Y.182
4 PLIP interactions:1 interactions with chain B, 3 interactions with chain A- Water bridges: B:H.107, A:Q.116
- Hydrogen bonds: A:I.45, A:Q.116
GOL.11: 8 residues within 4Å:- Chain B: S.24, G.27, E.28, V.29, H.64, F.65, P.66
- Chain F: P.55
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:G.27, B:V.29
GOL.12: 2 residues within 4Å:- Chain B: Y.12
- Chain D: Y.12
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:Y.12
GOL.13: 5 residues within 4Å:- Chain A: H.103, Y.182, P.202
- Chain B: Q.116, L.119
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:Q.116, B:Q.116
- Water bridges: B:I.45
GOL.21: 5 residues within 4Å:- Chain D: W.17, H.56, P.59, H.61, A.62
No protein-ligand interaction detected (PLIP)GOL.26: 8 residues within 4Å:- Chain E: S.24, G.27, E.28, V.29, F.30, H.64, F.65, P.66
3 PLIP interactions:3 interactions with chain E- Hydrogen bonds: E:G.27, E:V.29, E:H.64
GOL.27: 6 residues within 4Å:- Chain E: A.44, I.45, Q.116, L.119
- Chain F: H.103, Y.182
4 PLIP interactions:1 interactions with chain F, 3 interactions with chain E- Water bridges: F:H.107, E:Q.116
- Hydrogen bonds: E:I.45, E:Q.116
GOL.32: 8 residues within 4Å:- Chain B: P.55
- Chain F: S.24, G.27, E.28, V.29, H.64, F.65, P.66
2 PLIP interactions:2 interactions with chain F- Hydrogen bonds: F:G.27, F:V.29
GOL.33: 2 residues within 4Å:- Chain F: Y.12
- Chain H: Y.12
1 PLIP interactions:1 interactions with chain F- Hydrogen bonds: F:Y.12
GOL.34: 5 residues within 4Å:- Chain E: H.103, Y.182, P.202
- Chain F: Q.116, L.119
3 PLIP interactions:3 interactions with chain F- Hydrogen bonds: F:Q.116, F:Q.116
- Water bridges: F:I.45
GOL.42: 5 residues within 4Å:- Chain H: W.17, H.56, P.59, H.61, A.62
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Iwasaki, W. et al., Crystal Structure of the Stationary Phase Survival Protein SurE with Metal Ion and AMP. J.Mol.Biol. (2007)
- Release Date
- 2007-08-28
- Peptides
- 5'-nucleotidase surE: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
AF
BG
CH
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-octamer
- Ligands
- 8 x MN: MANGANESE (II) ION(Non-covalent)
- 22 x SO4: SULFATE ION(Non-functional Binders)
- 12 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Iwasaki, W. et al., Crystal Structure of the Stationary Phase Survival Protein SurE with Metal Ion and AMP. J.Mol.Biol. (2007)
- Release Date
- 2007-08-28
- Peptides
- 5'-nucleotidase surE: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
AF
BG
CH
D