SMTL ID : 2e85.1

Crystal Structure of the Hydrogenase 3 Maturation protease

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

6 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: G.42, A.45, N.48, D.49 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:G.42, A:A.45, A:D.49, H2O.1, H2O.1 CA.2: 1 residues within 4Å: Chain A: D.119 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:D.119, H2O.1, H2O.2, H2O.3, H2O.3 CA.3: 4 residues within 4Å: Chain B: G.42, A.45, N.48, D.49 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:G.42, B:A.45, B:D.49, H2O.6, H2O.6 CA.4: 3 residues within 4Å: Chain B: D.19, D.65, A.66 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.19, B:D.65, B:A.66, H2O.8, H2O.9 CA.5: 3 residues within 4Å: Chain A: D.102 Chain B: Q.103, E.106 5 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B, 3 Ligand-Water interactions Metal complexes: A:D.102, B:E.106, H2O.3, H2O.6, H2O.7 CA.6: 1 residues within 4Å: Chain B: E.143 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:E.143, B:E.143, H2O.7, H2O.7, H2O.8

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kumarevel, T. et al., Crystal structure of hydrogenase maturating endopeptidase HycI from Escherichia coli. Biochem.Biophys.Res.Commun. (2009)

Release Date

2008-01-22

Peptides

Hydrogenase 3 maturation protease: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Hydrogenase 3 maturation protease